Construct: ORF TRCN0000480437

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014337.2_s317c1
Derived from:
ccsbBroadEn_10684
DNA Barcode:
ATTTCATTATTATATTTCTAGTTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AQP7 (364)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480437
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 364 AQP7 aquaporin 7 NM_001318156.1 100% 100%
2 human 364 AQP7 aquaporin 7 XM_017014706.2 91.3% 89.3% (many diffs)
3 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447730.1 85.6% 81.7% (many diffs)
4 human 364 AQP7 aquaporin 7 XM_024447539.1 83.7% 83.7% 0_1ins105
5 human 364 AQP7 aquaporin 7 XM_024447535.1 79.1% 79.1% 1_171del
6 human 364 AQP7 aquaporin 7 XM_024447536.1 79.1% 79.1% 1_171del
7 human 364 AQP7 aquaporin 7 XM_006716765.3 75.7% 68.1% 571_629del;708_855del
8 human 364 AQP7 aquaporin 7 XM_011517867.2 75.7% 68.1% 571_629del;708_855del
9 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447731.1 75.3% 71.8% (many diffs)
10 human 364 AQP7 aquaporin 7 NM_001318157.1 72.5% 70.9% (many diffs)
11 human 364 AQP7 aquaporin 7 NM_001318158.1 72.2% 70.6% (many diffs)
12 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447729.1 66.5% 56.4% (many diffs)
13 human 364 AQP7 aquaporin 7 XM_017014701.1 63.5% 56% 0_1ins105;466_524del;603_750del
14 human 364 AQP7 aquaporin 7 XM_017014702.2 63.5% 56% 0_1ins105;466_524del;603_750del
15 human 364 AQP7 aquaporin 7 XM_017014704.1 63.5% 56% 0_1ins105;466_524del;603_750del
16 human 364 AQP7 aquaporin 7 XM_017014705.2 63.5% 56% 0_1ins105;466_524del;603_750del
17 human 364 AQP7 aquaporin 7 XM_024447537.1 63.5% 56% 0_1ins105;466_524del;603_750del
18 human 364 AQP7 aquaporin 7 XM_024447538.1 63.5% 56% 0_1ins105;466_524del;603_750del
19 human 364 AQP7 aquaporin 7 XM_017014700.1 63.3% 57.1% 1_168del;739_797del;876_1023del
20 human 364 AQP7 aquaporin 7 NM_001170.3 63.1% 56.9% 1_171del;742_800del;879_1026del
21 human 364 AQP7 aquaporin 7 XM_005251453.3 63.1% 56.9% 1_171del;742_800del;879_1026del
22 human 364 AQP7 aquaporin 7 XM_011517866.3 63.1% 56.9% 1_171del;742_800del;879_1026del
23 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_006712887.3 55.2% 48% (many diffs)
24 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_017005469.2 42.5% 33.5% (many diffs)
25 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_017005468.2 40% 23.7% (many diffs)
26 human 364 AQP7 aquaporin 7 NR_134514.1 36.6% (many diffs)
27 human 364 AQP7 aquaporin 7 NR_134515.1 34.3% (many diffs)
28 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447732.1 31.2% 23.1% (many diffs)
29 human 364 AQP7 aquaporin 7 NR_134513.1 29.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
714
ORF length:
648
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt tctaaataaa aaatatggga gctaccttgg tgtcaacttg ggttttggct
121tcggagtcac catgggagtg cacgtggcag gccgcatctc tggagcccac atgaacgcag
181ctgtgacctt tgctaactgt gcgctgggcc gcgtgccctg gaggaagttt ccggtctatg
241tgctggggca gttcctgggc tccttcctgg cggctgccac catctacagt ctcttctaca
301cggCCATTCT CCACTTTTCG GGTGGACAGC TGATGGTGAC CGGTCCCGTC GCTACAGCTG
361GCATTTTTGC CACCTACCTT CCTGATCACA TGACATTGTG GCGGGGCTTC CTGAATGAGG
421CGTGGCTGAC CGGGATGCTC CAGCTGTGTC TCTTCGCCAT CACGGACCAG GAGAACAACC
481CAGCACTGCC AGGAACAGAG GCGCTGGTGA TAGGCATCCT CGTGGTCATC ATCGGGGTGT
541CCCTTGGCAT GAACACAGGA TATGCCATCA ACCCGTCCCG GGACCTGCCC CCCCGCATCT
601TCACCTTCAT TGCTGGTTGG GGCAAACAGG TCTTCAGGTG GCATCATCTA CCTGGTCTTC
661ATTGGCTCCA CCATCCCACG GGAGCCCCTG AAATTGGAGG ATTCTGTGGC GTATGCCCAA
721CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
781ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
841TATCTTGTGG AAAGGACGAA TTTCATTATT ATATTTCTAG TTAACGCGTT AAGTCgacaa
901tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)