Construct: ORF TRCN0000488884
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF021634.1_s317c1
- DNA Barcode:
- ACTAGTAATCTGCAACAAAAACCT
- Epitope Tag:
- V5 (not translated due to prior stop codon)
- Notes:
- Has stop codon in insert
Originally Annotated References:
- Gene:
- ESRRG (2104)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000488884
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
---|---|---|---|---|---|---|---|---|
1 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001134285.3 | 99.9% | 100% | 888G>A |
2 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243509.2 | 99.9% | 100% | 888G>A |
3 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243510.3 | 99.9% | 100% | 888G>A |
4 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243511.3 | 99.9% | 100% | 888G>A |
5 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243512.1 | 99.9% | 100% | 888G>A |
6 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243513.1 | 99.9% | 100% | 888G>A |
7 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243514.2 | 99.9% | 100% | 888G>A |
8 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243515.2 | 99.9% | 100% | 888G>A |
9 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243519.1 | 99.9% | 100% | 888G>A |
10 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350122.2 | 99.9% | 100% | 888G>A |
11 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350123.2 | 99.9% | 100% | 888G>A |
12 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350124.2 | 99.9% | 100% | 888G>A |
13 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350125.2 | 99.9% | 100% | 888G>A |
14 | human | 2104 | ESRRG | estrogen related receptor g... | NM_206594.2 | 99.9% | 100% | 888G>A |
15 | human | 2104 | ESRRG | estrogen related receptor g... | NM_206595.3 | 99.9% | 100% | 888G>A |
16 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000638.2 | 99.9% | 100% | 888G>A |
17 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000639.1 | 99.9% | 100% | 888G>A |
18 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000641.1 | 99.9% | 100% | 888G>A |
19 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000644.1 | 99.9% | 100% | 888G>A |
20 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000645.1 | 99.9% | 100% | 888G>A |
21 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453975.1 | 99.9% | 100% | 888G>A |
22 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453979.1 | 99.9% | 100% | 888G>A |
23 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453980.1 | 99.9% | 100% | 888G>A |
24 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509274.1 | 98.3% | 98.1% | 632_652del;909G>A |
25 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509275.1 | 98.3% | 98.1% | 632_652del;909G>A |
26 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509276.1 | 98.3% | 98.1% | 632_652del;909G>A |
27 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509277.1 | 98.3% | 98.1% | 632_652del;909G>A |
28 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509278.1 | 98.3% | 98.1% | 632_652del;909G>A |
29 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509279.1 | 98.3% | 98.1% | 632_652del;909G>A |
30 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509280.2 | 98.3% | 98.1% | 632_652del;909G>A |
31 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000631.2 | 98.3% | 98.1% | 632_652del;909G>A |
32 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000632.2 | 98.3% | 98.1% | 632_652del;909G>A |
33 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000633.1 | 98.3% | 98.1% | 632_652del;909G>A |
34 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000634.2 | 98.3% | 98.1% | 632_652del;909G>A |
35 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000635.1 | 98.3% | 98.1% | 632_652del;909G>A |
36 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000636.2 | 98.3% | 98.1% | 632_652del;909G>A |
37 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000637.1 | 98.3% | 98.1% | 632_652del;909G>A |
38 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453959.1 | 98.3% | 98.1% | 632_652del;909G>A |
39 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453960.1 | 98.3% | 98.1% | 632_652del;909G>A |
40 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509271.2 | 97.2% | 97% | 1_15del;647_667del;924G>A |
41 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000630.1 | 97.2% | 97% | 1_15del;647_667del;924G>A |
42 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001438.4 | 94.9% | 94.9% | 1_69del;957G>A |
43 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000628.1 | 94.2% | 94.1% | 1_57del;689_709del;966G>A |
44 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000626.1 | 93.8% | 93.9% | 1_84del;972G>A |
45 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000627.1 | 93.8% | 93.9% | 1_84del;972G>A |
46 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509266.3 | 92.4% | 92.5% | 1_105del;993G>A |
47 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243518.2 | 92.4% | 92.3% | 1_84del;716_736del;993G>A |
48 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509267.1 | 92.4% | 92.3% | 1_84del;716_736del;993G>A |
49 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509268.2 | 92.4% | 92.3% | 1_84del;716_736del;993G>A |
50 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509269.2 | 92.4% | 92.3% | 1_84del;716_736del;993G>A |
51 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509265.3 | 91.1% | 90.9% | 1_105del;737_757del;1014G>A |
52 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000621.2 | 91.1% | 90.9% | 1_105del;737_757del;1014G>A |
53 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000622.1 | 91.1% | 90.9% | 1_105del;737_757del;1014G>A |
54 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000623.2 | 91.1% | 90.9% | 1_105del;737_757del;1014G>A |
55 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000624.2 | 91.1% | 90.9% | 1_105del;737_757del;1014G>A |
56 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000625.1 | 91.1% | 90.9% | 1_105del;737_757del;1014G>A |
57 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243507.2 | 90.9% | 91% | 400_401ins117;771G>A |
58 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243506.2 | 62.6% | 62.7% | 0_1ins486;402G>A |
59 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243505.2 | 47.5% | 47.5% | 0_1ins684;204G>A |
60 | mouse | 26381 | Esrrg | estrogen-related receptor g... | NM_001243792.1 | 93.1% | 100% | (many diffs) |
61 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497164.3 | 93.1% | 100% | (many diffs) |
62 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497165.3 | 93.1% | 100% | (many diffs) |
63 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497167.3 | 93.1% | 100% | (many diffs) |
64 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497170.1 | 93.1% | 100% | (many diffs) |
65 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238914.2 | 90.6% | 97.3% | (many diffs) |
66 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238915.2 | 90.6% | 97.3% | (many diffs) |
67 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238916.2 | 90.6% | 97.3% | (many diffs) |
68 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238917.2 | 90.6% | 97.3% | (many diffs) |
69 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238918.2 | 90.6% | 97.3% | (many diffs) |
70 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238919.2 | 90.6% | 97.3% | (many diffs) |
71 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238920.2 | 90.6% | 97.3% | (many diffs) |
72 | mouse | 26381 | Esrrg | estrogen-related receptor g... | NM_011935.3 | 88.4% | 94.9% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 72
- ORF end:
- 1377
- ORF length:
- 1305
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcac catgtcaaac aaagatcgac acattgattc cagctgttcg tccttcatca 121 agacggaacc ttccagccca gcctccctga cggacagcgt caaccaccac agccctggtg 181 gctcttcaga cgccagtggg agctacagtt caaccatgaa tggccatcag aacggacttg 241 actcgccacc tctctaccct tctgctccta tcctgggagg tagtgggcct gtcaggaaac 301 tgtatgatga ctgctccagc accattgttg aagatcccca gaccaagtgt gaatacatgc 361 tcaactcgat gcccaagaga ctgtgtttag tgtgtggtga catcgcttct gggtaccact 421 atggggtagc atcatgtgaa gcctgcaagg cattcttcaa gaggacaatt caaggcaata 481 tagaatacag ctgccctgcc acgaatgaat gtgaaatcac aaagcgcaga cgtaaatcct 541 gccaggcttg ccgcttcatg aagtgtttaa aagtgggcat gctgaaagaa ggggtgcgtc 601 ttgacagagt acgtggaggt cggcagaagt acaagcgcag gatagatgcg gagaacagcc 661 catacctgaa ccctcagctg gttcagccag ccaaaaagcc atataacaag attgtctcac 721 atttgttggt ggctgaaccg gagaagatct atgccatgcc tgaccctact gtccccgaca 781 gtgacatcaa agccctcact acactgtgtg acttggccga ccgagagttg gtggttatca 841 ttggatgggc gaagcatatt ccaggcttct ccacgctgtc cctggcggac cagatgagcc 901 ttctgcagag tgcttggatg gaaattttga tccttggtgt cgtataccgg tctctttcat 961 ttgaggatga acttGTCTAT GCAGACGATT ATATAATGGA CGAAGACCAG TCCAAATTAG 1021 CAGGCCTTCT TGATCTAAAT AATGCTATCC TGCAGCTGGT AAAGAAATAC AAGAGCATGA 1081 AGCTGGAAAA AGAAGAATTT GTCACCCTCA AAGCTATAGC TCTTGCTAAT TCAGACTCCA 1141 TGCACATAGA AGATGTTGAA GCCGTTCAGA AGCTTCAGGA TGTCTTACAT GAAGCGCTGC 1201 AGGATTATGA AGCTGGCCAG CACATGGAAG ACCCTCGTCG AGCTGGCAAG ATGCTGATGA 1261 CACTGCCACT CCTGAGGCAG ACCTCTACCA AGGCCGTGCA GCATTTCTAC AACATCAAAC 1321 TAGAAGGCAA AGTCCCAATG CACAAACTTT TTTTGGAAAT GTTGGAGGCC AAGGTCTGAG 1381 ACCCAGCTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG 1441 GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC 1501 TTTATATATC TTGTGGAAAG GACGAACTAG TAATCTGCAA CAAAAACCTA CGCGTTAAGT 1561 Cgacaatcaa cctctggatt acaaaatttg tgaaagatt