Construct: ORF TRCN0000489876
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF019682.1_s317c1
- DNA Barcode:
- GCATTCACCTTCAGGTGAGCCTTG
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- TYRO3 (7301)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000489876
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 7301 | TYRO3 | TYRO3 protein tyrosine kinase | NM_006293.4 | 99.7% | 99.4% | (many diffs) |
| 2 | human | 7301 | TYRO3 | TYRO3 protein tyrosine kinase | NM_001330264.1 | 94.7% | 94.5% | (many diffs) |
| 3 | human | 7301 | TYRO3 | TYRO3 protein tyrosine kinase | XM_017022543.2 | 86.1% | 85.5% | (many diffs) |
| 4 | human | 7302 | TYRO3P | TYRO3P protein tyrosine kin... | NR_028510.1 | 27.5% | (many diffs) | |
| 5 | mouse | 22174 | Tyro3 | TYRO3 protein tyrosine kina... | NM_019392.2 | 86.7% | 88.5% | (many diffs) |
| 6 | mouse | 22174 | Tyro3 | TYRO3 protein tyrosine kina... | XM_017317147.1 | 85.1% | 84.7% | (many diffs) |
| 7 | mouse | 22174 | Tyro3 | TYRO3 protein tyrosine kina... | NM_001290800.1 | 84.3% | 85.8% | (many diffs) |
| 8 | mouse | 22174 | Tyro3 | TYRO3 protein tyrosine kina... | XM_006499160.1 | 83.1% | 85% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 75
- ORF end:
- 2748
- ORF length:
- 2673
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcgc caccatggcg ctgaggcgga gcatggggcg gccggggctc ccgccgctgc 121 cgctgccgcc gccactgcgg ctcgggctgc tgctggcggc tctggcttct ctgctgctcc 181 cggagtccgc cgccgcaggt ctgaagctca tgggagcccc ggtgaagctg acagtgtctc 241 aggggcagcc ggtgaagctc aactgcagtg tggaggggat ggaggagcct gacatccagt 301 gggtgaagga tggggctgtg gtccagaact tggaccagtt gtacatccca gtcagcgagc 361 agcactggat cggcttcctc agcctgaagt cagtggagcg ctctgacgcc ggccggtact 421 ggtgccaggt ggaggatggg ggtgaaaccg agatctccca gccagtgtgg ctcacggtag 481 aaggtgtgcc atttttcaca gtggagccaa aagatctggc agtgccaccc aatgcccctt 541 tccaactgtc ttgtgaggct gtgggtcccc ctgaacctgt taccattgtc tggtggagag 601 gaactacgaa gatcggggga cccgctccct ctccatctgt tttaaatgta acaggggtga 661 cccagagcac catgttttcc tgtgaagctc acaacctaaa aggcctggcc tcttctcgca 721 cagccactgt tcaccttcaa gcactgcctg cagccccctt caacatcacc gtgacaaagc 781 tttccagcag caacgctagt gtggcctgga tgccaggtgc cgatggccga gctctgctac 841 agtcctgtac agttcaggtg acacaggccc caggaggctg ggaagtcctg gctgttgtgg 901 tccctgtgcc cccctttacc tgcctgctcc gggacctggt gcctgccacc aactacagcc 961 tcagggtgcg ctgtgccaat gccttggggc cctctcccta tgctgactgg gtgccctttc 1021 agaccaaggg tctagcccca gccagcgctc cccaaaacct ccatgccatc cgcacagatt 1081 caggcctcat cttggagtgg gaagaagtga tccccgaggc ccctttggaa ggccccctgg 1141 gaccctacaa actgtcctgg gttcaagaca atggaaccca ggatgagctg acagtggagg 1201 ggaccagggc caatttgaca ggctgggatc cccaaaagga cctgatcgta cgtgtgtgcg 1261 tctccaatgc agttggctgt ggaccctgga gtcagccact ggtggtctct tctcatgacc 1321 gtgcaggcca gcagggccct cctcacagcc gcacatcctg ggtacctgtg gtccttggtg 1381 tgctaacggc cctggtgacg gctgctgccc tggccctcat cctgcttcga aagagacgga 1441 aagagacgcg gtttgggcaa gcctttgaca gtgtcatggc ccggggagag ccagccgttc 1501 acttccgggc agcccggtcc ttcaatcgag aaaggcccga gcgcatcgag gccacattgg 1561 acagcttggg catcagcgat gaactaaagg aaaaactgga ggatatgctc atcccagagc 1621 agcagttcac cctgggccgg atgttgggca aaggagagtt tggttcagtg cgggaggccc 1681 agctgaagca agaggatggc tcctttgtga aagtggctgt gaagatgctg aaagctgaca 1741 tcattgcctc aagcgacatt gaagagttcc tcagggaagc agcttgcatg aaggagtttg 1801 accatccaca cgtggccaaa cttgttgggg taagcctccg gagcagggct aaaggccgtc 1861 tccccatccc catggtcatc ttgcccttca tgaagcatgg ggacctgcat gccttcctgc 1921 tcgcctcccg gattggggag aaccccttta acctacccct ccagaccctg atccggttca 1981 tggtggacat tgcctgcggc atggagtacc tgagctctcg gaacttcatc caccgagacc 2041 tggctgctcg gaattgcatg ctggcagagg acatgacagt gtgtgtggct gacttcggac 2101 tctcccggaa gatctacagt ggggactact atcgtcaagg ctgtgcctcc aaactgcctg 2161 tcaagtggct ggccctggag agcctggccg acaacctgta tactgtgcag agtgacgtgt 2221 gggcgttcgg ggtgaccatg tgggagatca tgacacgtgg gcagacgcca tatgctggca 2281 tcgaaaacgc tgagatttac aactacctca ttggcgggaa ccgcctgaaa cagccTCCGG 2341 AGTGTATGGA GGACGTGTAT GATCTCATGT ACCAGTGCTG GAGTGCTGAC CCCAAGCAGC 2401 GCCCGAGCTT TACTTGTCTG CGAATGGAAC TGGAGAACAT CTTGGGCCAG CTGTCTGTGC 2461 TATCTGCCAG CCAGGACCCC TTATACATCA ACATCGAGAG AGCTGAGGAG CCCACTGCGG 2521 GAGGCAGCAT GGAGCTACCT GGCGGGGATC AGCCCTACAG TGGGGCTGGG GATGGCAGTG 2581 GCATGGGGGC AGTGGGTGGC ACTCCCAGTG ACTGTCGGTA CATACTCACC CCCGGAGGGC 2641 TGGCTGAGCA GCCAGGGCAG GCAGAGCACC AGCCAGAGAG TCCCCTCAAT GAGACACAGA 2701 GGCTTTTGCT GCTGCAGCAA GGGCTACTGC CACACAGTAG CTGTGACCCA GCTTTCTTGT 2761 ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT 2821 AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG 2881 GAAAGGACGA GCATTCACCT TCAGGTGAGC CTTGACGCGT TAAGTCgaca atcaacctct 2941 ggattacaaa atttgtgaaa gatt