Construct: ORF TRCN0000491660

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017708.1_s317c1
Derived from:
ccsbBroadEn_03398
DNA Barcode:
CTATAGACTCCTGTTCTGCAACTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CSNK1G1 (53944)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491660
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329606.2 100% 100%
2 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_022048.5 100% 100%
3 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329607.2 93.1% 93.6% (many diffs)
4 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329605.2 86% 86.3% (many diffs)
5 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242710.1 93.6% 97.6% (many diffs)
6 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242709.1 91.9% 95.5% (many diffs)
7 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_017313273.1 86.1% 87.8% (many diffs)
8 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 NM_173185.2 86.1% 89.7% (many diffs)
9 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242708.1 86.1% 89.7% (many diffs)
10 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242711.1 84.9% 84.3% (many diffs)
11 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_006511008.2 84.6% 88% (many diffs)
12 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242703.1 84.6% 88% (many diffs)
13 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242704.1 84.6% 88% (many diffs)
14 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242705.1 84.6% 88% (many diffs)
15 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242706.1 84.6% 88% (many diffs)
16 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242707.1 84.6% 88% (many diffs)
17 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242712.1 83.9% 87.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1335
ORF length:
1266
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggaccatcct agtagggaaa aggatgaaag acaacggaca actaaaccca
121tggcacaaag gagtgcacac tgctctcgac catctggctc ctcatcgtcc tctggggttc
181ttatggtggg acccaacttc agggttggca agaagatagg atgtgggaac ttcggagagc
241tcagattagg taaaaatctc tacaccaatg aatatgtagc aatcaaactg gaaccaataa
301aatcacgtgc tccacagctt catttagagt acagatttta taaacagctt ggcagtgcag
361gtgaaggtct cccacaggtg tattactttg gaccatgtgg gaaatataat gccatggtgc
421tggagctcct tggccctagc ttggaggact tgtttgacct ctgtgaccga acatttactt
481tgaagacggt gttaatgata gccatccagc tgctttctcg aatggaatac gtgcactcaa
541agaacctcat ttaccgagat gtcaagccag agaacttcct gattggtcga caaggcaata
601agaaagagca tgttatacac attatagact ttggactggc caaggaatac attgaccccg
661aaaccaaaaa acacatacct tatagggaac acaaaagttt aactggaact gcaagatata
721tgtctatcaa cacgcatctt ggcaaagagc aaagccggag agatgatttg gaagccctag
781gccatatgtt catgtatttc cttcgaggca gcctcccctg gcaaggactc aaggctgaca
841cattaaaaga gagatatcaa aaaattggtg acaccaaaag gaatactccc attgaagctc
901tctgtgagaa ctttccagag gagatggcaa cctaccTTCG ATATGTCAGG CGACTGGACT
961TCTTTGAAAA ACCTGATTAT GAGTATTTAC GGACCCTCTT CACAGACCTC TTTGAAAAGA
1021AAGGCTACAC CTTTGACTAT GCCTATGATT GGGTTGGGAG ACCTATTCCT ACTCCAGTAG
1081GGTCAGTTCA CGTAGATTCT GGTGCATCTG CAATAACTCG AGAAAGCCAC ACACATAGGG
1141ATCGGCCATC ACAACAGCAG CCTCTTCGAA ATCAGGTGGT TAGCTCAACC AATGGAGAGC
1201TGAATGTTGA TGATCCCACG GGAGCCCACT CCAATGCACC AATCACAGCT CATGCCGAGG
1261TGGAGGTAGT GGAGGAAGCT AAGTGCTGCT GTTTCTTTAA GAGGAAAAGG AAGAAGACTG
1321CTCAGCGCCA CAAGTTGCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
1381CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
1441TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA CTATAGACTC CTGTTCTGCA
1501ACTTACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)