Construct: ORF ccsbBroadEn_07015

Construct Description:

• Construct Type: ORF
• Other Identifiers: ORF018427.1_s300c1, BRDN0000392320
• DNA Barcode: None
• Epitope Tag: None
• Notes: No stop codon in insert

Originally Annotated References:

• Gene: SULT1A1 (6817)

Vector Information:

• Vector Backbone: pDONR223
• Pol II Cassette 1: n/a
• Pol II Cassette 2: n/a
• Selection Marker: n/a
• Visible Reporter: n/a
• Epitope Tag: n/a

Current transcripts matched by this ORF:

	Taxon	Gene	Symbol	Description	Transcript	Nuc. Match %	Prot. Match %	Match Diffs
1	human	6817	SULT1A1	sulfotransferase family 1A ...	NM_001055.3	99.8%	99.6%	638G>A
2	human	6817	SULT1A1	sulfotransferase family 1A ...	NM_177529.2	99.8%	99.6%	638G>A
3	human	6817	SULT1A1	sulfotransferase family 1A ...	NM_177530.2	99.8%	99.6%	638G>A
4	human	6817	SULT1A1	sulfotransferase family 1A ...	NM_177534.2	99.8%	99.6%	638G>A
5	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023611.2	99.8%	99.6%	638G>A
6	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023612.2	99.8%	99.6%	638G>A
7	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023613.2	99.8%	99.6%	638G>A
8	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_024450409.1	99.8%	99.6%	638G>A
9	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_024450410.1	99.8%	99.6%	638G>A
10	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_024450411.1	99.8%	99.6%	638G>A
11	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023604.1	97.8%	97.6%	593_610del;656G>A
12	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023605.1	97.8%	97.6%	593_610del;656G>A
13	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023608.1	97.8%	97.6%	593_610del;656G>A
14	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023609.1	97.8%	97.6%	593_610del;656G>A
15	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023610.1	97.8%	97.6%	593_610del;656G>A
16	human	6799	SULT1A2	sulfotransferase family 1A ...	NM_177528.2	96.8%	95.5%	(many diffs)
17	human	6799	SULT1A2	sulfotransferase family 1A ...	NM_001054.4	96.7%	95.2%	(many diffs)
18	human	445329	SULT1A4	sulfotransferase family 1A ...	NM_001017390.2	94.3%	92.5%	(many diffs)
19	human	6818	SULT1A3	sulfotransferase family 1A ...	NM_177552.3	94.3%	92.5%	(many diffs)
20	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_017023607.2	76.3%	76.1%	1_273del;911G>A
21	human	6817	SULT1A1	sulfotransferase family 1A ...	XM_024450408.1	76.1%	75.9%	1_276del;914G>A
22	human	6799	SULT1A2	sulfotransferase family 1A ...	NM_001363863.1	69.7%	64.7%	(many diffs)
23	human	6817	SULT1A1	sulfotransferase family 1A ...	NM_177536.3	65.9%	59%	(many diffs)
24	human	6817	SULT1A1	sulfotransferase family 1A ...	XR_001751973.1	65%		(many diffs)
25	human	100526831	SLX1B-SULT1A4	SLX1B-SULT1A4 readthrough (...	NR_037609.1	37.7%		(many diffs)
26	human	100526830	SLX1A-SULT1A3	SLX1A-SULT1A3 readthrough (...	NR_037608.1	37.6%		(many diffs)

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:

66

ORF end:

951

ORF length:

885

Sequence:

1	gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61	TTGGCATGGA GCTGATCCAG GACACCTCCC GCCCGCCACT GGAGTACGTG AAGGGGGTCC
121	CGCTCATCAA GTACTTTGCA GAGGCACTGG GGCCCCTGCA GAGCTTCCAG GCCCGGCCTG
181	ATGACCTGCT CATCAGCACC TACCCCAAGT CCGGCACTAC CTGGGTAAGC CAGATTCTGG
241	ACATGATCTA CCAGGGTGGT GACCTGGAGA AGTGTCACCG AGCTCCCATC TTCATGCGGG
301	TGCCCTTCCT TGAGTTCAAA GCCCCAGGGA TTCCCTCAGG GATGGAGACT CTGAAAGACA
361	CACCGGCCCC ACGACTCCTG AAGACACACC TGCCCCTGGC TCTGCTCCCC CAGACTCTGT
421	TGGATCAGAA GGTCAAGGTG GTCTATGTTG CCCGCAACGC AAAGGATGTG GCAGTTTCCT
481	ACTACCACTT CTACCACATG GCCAAGGTGC ACCCTGAGCC TGGGACCTGG GACAGCTTCC
541	TGGAGAAGTT CATGGTCGGA GAAGTGTCCT ACGGATCCTG GTACCAGCAC GTGCAGGAGT
601	GGTGGGAGCT GAGCCGCACC CACCCTGTTC TCTACCTCTT CTATGAAGAC ATGAAGGAGA
661	ACCCGAAAAG GGAGATTCAA AAGATCCTGG AGTTTGTGGG GCACTCCCTG CCAGAGGAGA
721	CCGTGGACTT CGTGGTTCAG CACACGTCGT TCAAGGAGAT GAAGAAGAAC CCTATGACCA
781	ACTACACCAC CGTCCCCCAG GAGTTCATGG ACCACAGCAT CTCCCCCTTC ATGAGGAAAG
841	GCATGGCTGG GGACTGGAAG ACCACCTTCA CCGTGGCGCA GAATGAGCGC TTCGATGCGG
901	ACTATGCGGA GAAGATGGCA GGCTGCAGCC TCAGCTTCCG CTCTGAGCTG TGCCCAACTT
961	TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA