Construct: ORF TRCN0000465897

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011711.1_s317c1
Derived from:
ccsbBroadEn_12729
DNA Barcode:
CCCGCAATCACAACGATCTCAAAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF611 (81856)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000465897
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 107987264 LOC107987264 putative zinc finger protei... XR_002958390.1 43.4% (many diffs)
2 human 7696 ZNF137P zinc finger protein 137, ps... NR_023311.1 16.4% (many diffs)
3 human 79986 ZNF702P zinc finger protein 702, ps... NR_003578.1 12.9% (many diffs)
4 human 55762 ZNF701 zinc finger protein 701 XR_001753715.2 10.8% (many diffs)
5 human 55762 ZNF701 zinc finger protein 701 XR_001753716.2 10.2% (many diffs)
6 human 388558 ZNF808 zinc finger protein 808 XR_935832.3 9.5% (many diffs)
7 human 388558 ZNF808 zinc finger protein 808 XR_002958314.1 9.1% (many diffs)
8 human 90333 ZNF468 zinc finger protein 468 NR_102301.2 8.6% (many diffs)
9 human 90333 ZNF468 zinc finger protein 468 NR_102300.2 8.4% (many diffs)
10 human 90333 ZNF468 zinc finger protein 468 NR_102299.2 8.4% (many diffs)
11 human 7576 ZNF28 zinc finger protein 28 NR_163139.1 8.1% (many diffs)
12 human 170958 ZNF525 zinc finger protein 525 NR_145445.2 7.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
519
ORF length:
453
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgct acaacgatta caaatcattg gagaatccat aatgaagaga gatcttacaa
121gtgtaataaa tgtggcaaat ttttcagaga tcgttcacat attgcaggtc atcggtgaac
181tcatactgga gagaaaCCTT ACAAATGTCA TGACTGTGCC AAGGTCTTCA GTCAAGCTTC
241ATCCTATGCA AAACATAGGA GAATTTATAC AGGAGAGAAA CCTCACAAGT GTGATGATTG
301TGGCAAAGCC TTTGCTTCAC GTTCACACGT CATTAGACAT CAGAGAATCT ATACTGGACA
361GAAATCTTAC AAATGTCATC AGTGTGGCAA GGTCTTCAGT CCAAGATCAC TCCATGCAGA
421ACATCAGAAA ATTCATTTTT GAGATAACCG TTCCCAATGA AATGAGTATA GCAAACCATC
481AAGCATTAAT TGACATTGGA GTCAATTCAG CATTGACTTG CCCAACTTTC TTGTACAAAG
541TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
601GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
661ACGACCCGCA ATCACAACGA TCTCAAAAAC GCGTTAAGTC gacaatcaac ctctggatta
721caaaatttgt gaaagatt

Download FASTA (ORF) (Full)