Construct: ORF TRCN0000473453

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004466.1_s317c1
Derived from:
ccsbBroadEn_11428
DNA Barcode:
GGCGATTGTAATACATTATATCAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SNAP91 (9892)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473453
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9892 SNAP91 synaptosome associated prot... NM_001242794.1 99% 99% 9C>A;11A>G;1786_1800del
2 human 9892 SNAP91 synaptosome associated prot... XM_017011590.2 70.5% 70.3% (many diffs)
3 human 9892 SNAP91 synaptosome associated prot... XM_017011589.2 69.3% 69.1% (many diffs)
4 human 9892 SNAP91 synaptosome associated prot... XM_011536276.3 68.2% 68% (many diffs)
5 human 9892 SNAP91 synaptosome associated prot... XM_017011580.2 68.2% 68% (many diffs)
6 human 9892 SNAP91 synaptosome associated prot... XM_017011581.2 68.2% 68% (many diffs)
7 human 9892 SNAP91 synaptosome associated prot... XM_017011582.2 68.2% 68% (many diffs)
8 human 9892 SNAP91 synaptosome associated prot... NM_001242793.1 67.7% 67.7% (many diffs)
9 human 9892 SNAP91 synaptosome associated prot... XM_017011583.1 67.6% 67.5% (many diffs)
10 human 9892 SNAP91 synaptosome associated prot... XM_017011584.2 67.6% 67.5% (many diffs)
11 human 9892 SNAP91 synaptosome associated prot... XM_017011585.2 67.6% 67.5% (many diffs)
12 human 9892 SNAP91 synaptosome associated prot... XM_017011586.1 67.6% 67.5% (many diffs)
13 human 9892 SNAP91 synaptosome associated prot... XM_017011587.1 67.6% 67.5% (many diffs)
14 human 9892 SNAP91 synaptosome associated prot... XM_011536275.2 67.6% 67.4% (many diffs)
15 human 9892 SNAP91 synaptosome associated prot... XM_017011575.1 67.6% 67.4% (many diffs)
16 human 9892 SNAP91 synaptosome associated prot... XM_017011576.1 67.6% 67.4% (many diffs)
17 human 9892 SNAP91 synaptosome associated prot... XM_017011577.1 67.6% 67.4% (many diffs)
18 human 9892 SNAP91 synaptosome associated prot... XM_011536273.3 67.4% 67.3% (many diffs)
19 human 9892 SNAP91 synaptosome associated prot... XM_017011570.2 67.4% 67.3% (many diffs)
20 human 9892 SNAP91 synaptosome associated prot... XM_017011571.2 67.4% 67.3% (many diffs)
21 human 9892 SNAP91 synaptosome associated prot... XM_017011572.2 67.4% 67.3% (many diffs)
22 human 9892 SNAP91 synaptosome associated prot... XM_017011573.2 67.4% 67.3% (many diffs)
23 human 9892 SNAP91 synaptosome associated prot... XM_024446600.1 67.4% 67.3% (many diffs)
24 human 9892 SNAP91 synaptosome associated prot... XM_017011579.2 67% 66.8% (many diffs)
25 human 9892 SNAP91 synaptosome associated prot... XM_017011568.2 66.7% 66.6% (many diffs)
26 human 9892 SNAP91 synaptosome associated prot... XM_011536271.1 66.5% 66.4% (many diffs)
27 human 9892 SNAP91 synaptosome associated prot... XM_017011566.2 66.5% 66.4% (many diffs)
28 human 9892 SNAP91 synaptosome associated prot... XM_017011567.1 66.5% 66.4% (many diffs)
29 human 9892 SNAP91 synaptosome associated prot... XM_024446599.1 66.5% 66.4% (many diffs)
30 human 9892 SNAP91 synaptosome associated prot... XM_017011563.2 66% 66% (many diffs)
31 human 9892 SNAP91 synaptosome associated prot... XM_017011564.2 66% 66% (many diffs)
32 human 9892 SNAP91 synaptosome associated prot... XM_017011565.2 66% 66% (many diffs)
33 human 9892 SNAP91 synaptosome associated prot... XM_017011569.2 65.9% 65.8% (many diffs)
34 human 9892 SNAP91 synaptosome associated prot... XM_017011562.2 65.8% 65.7% (many diffs)
35 human 9892 SNAP91 synaptosome associated prot... XM_017011554.1 65.6% 65.6% (many diffs)
36 human 9892 SNAP91 synaptosome associated prot... XM_017011555.1 65.6% 65.6% (many diffs)
37 human 9892 SNAP91 synaptosome associated prot... XM_017011556.1 65.6% 65.6% (many diffs)
38 human 9892 SNAP91 synaptosome associated prot... NM_001242792.1 65.5% 65.3% (many diffs)
39 human 9892 SNAP91 synaptosome associated prot... NM_014841.2 65.5% 65.3% (many diffs)
40 human 9892 SNAP91 synaptosome associated prot... XM_005248770.5 65.5% 65.3% (many diffs)
41 human 9892 SNAP91 synaptosome associated prot... XM_006715615.1 65.5% 65.3% (many diffs)
42 human 9892 SNAP91 synaptosome associated prot... XM_011536265.1 65.5% 65.3% (many diffs)
43 human 9892 SNAP91 synaptosome associated prot... XM_011536266.1 65.5% 65.3% (many diffs)
44 human 9892 SNAP91 synaptosome associated prot... NM_001256717.1 65.5% 64.9% (many diffs)
45 human 9892 SNAP91 synaptosome associated prot... NM_001363677.1 64.9% 64.8% (many diffs)
46 human 9892 SNAP91 synaptosome associated prot... XM_011536269.1 64.9% 64.8% (many diffs)
47 human 9892 SNAP91 synaptosome associated prot... XM_017011557.2 64.9% 64.8% (many diffs)
48 human 9892 SNAP91 synaptosome associated prot... XM_017011558.1 64.9% 64.8% (many diffs)
49 human 9892 SNAP91 synaptosome associated prot... XM_017011559.1 64.9% 64.8% (many diffs)
50 human 9892 SNAP91 synaptosome associated prot... XM_017011560.2 64.9% 64.8% (many diffs)
51 human 9892 SNAP91 synaptosome associated prot... XM_024446601.1 63.5% 63.6% (many diffs)
52 human 9892 SNAP91 synaptosome associated prot... XM_017011574.2 63.1% 63% (many diffs)
53 human 9892 SNAP91 synaptosome associated prot... NM_001256718.1 51.9% 51.8% (many diffs)
54 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510904.4 85.9% 92% (many diffs)
55 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510903.4 85.6% 91.5% (many diffs)
56 mouse 20616 Snap91 synaptosomal-associated pro... NM_001277985.1 82.7% 88.9% (many diffs)
57 mouse 20616 Snap91 synaptosomal-associated pro... XM_030244159.1 81.9% 87.7% (many diffs)
58 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510902.4 62.7% 66.2% (many diffs)
59 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510901.4 61.3% 64.7% (many diffs)
60 mouse 20616 Snap91 synaptosomal-associated pro... XM_030244157.1 61.2% 64.7% (many diffs)
61 mouse 20616 Snap91 synaptosomal-associated pro... NM_001357772.1 60.8% 64.1% (many diffs)
62 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510899.4 60.7% 64.1% (many diffs)
63 mouse 20616 Snap91 synaptosomal-associated pro... XM_030244155.1 59.3% 62.7% (many diffs)
64 mouse 20616 Snap91 synaptosomal-associated pro... XM_030244156.1 59.3% 62.7% (many diffs)
65 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510896.4 59.2% 62.5% (many diffs)
66 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510895.4 59% 62.4% (many diffs)
67 mouse 20616 Snap91 synaptosomal-associated pro... NM_001357770.1 58.9% 62.1% (many diffs)
68 mouse 20616 Snap91 synaptosomal-associated pro... NM_013669.2 58.9% 62.1% (many diffs)
69 mouse 20616 Snap91 synaptosomal-associated pro... NM_001277983.1 58.4% 61.8% (many diffs)
70 mouse 20616 Snap91 synaptosomal-associated pro... NM_001277986.1 58.4% 61.6% (many diffs)
71 mouse 20616 Snap91 synaptosomal-associated pro... XM_017313237.2 58% 61.2% (many diffs)
72 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510897.2 56.6% 59.9% (many diffs)
73 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510898.4 56.2% 59.3% (many diffs)
74 mouse 20616 Snap91 synaptosomal-associated pro... NM_001277982.2 55.7% 58.7% (many diffs)
75 mouse 20616 Snap91 synaptosomal-associated pro... XM_006510900.3 55.7% 58.7% (many diffs)
76 mouse 20616 Snap91 synaptosomal-associated pro... NM_001357768.1 54.9% 34.2% (many diffs)
77 mouse 20616 Snap91 synaptosomal-associated pro... XM_030244158.1 53.9% 57% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1851
ORF length:
1785
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc gggacgaacg ctcacggatc ggatcgccgc cgctcagtac agcgttacag
121gctctgctgt agcaagagcg gtctgcaaag ccactactca tgaagtaatg ggccccaaga
181aaaagcacct ggactatttg atccaggcta ccaacgagac caatgttaat attcctcaga
241tggccgacac tctctttgag cgggcaacaa acagtagctg ggtggttgtg tttaaggctt
301tagtgacaac acatcatctc atggtgcatg gaaatgagag atttattcaa tatttggctt
361ctagaaatac actattcaat ctcagcaatt ttttggacaa aagtggatcc catggttatg
421atatgtctac cttcataagg cgctatagta gatatttgaa tgaaaaggct ttttcttaca
481gacagatggc ctttgatttt gccagggtga agaaaggggc cgatggtgta atgaggacaa
541tggctcccga aaagctgcta aagagtatgc caatactaca gggacaaatt gatgcactgc
601ttgaatttga tgtgcatcca aatgaactaa caaatggtgt cataaatgca gcatttatgc
661ttcttttcaa agatcttatc aaactttttg cttgctacaa tgatggtgtt attaacttac
721tcgaaaagtt ttttgaaatg aagaaaggac aatgtaaaga tgctctagaa atttacaaac
781gatttctaac tagaatgaca cgagtgtctg aatttctcaa ggttgcagag gctcccagca
841gtcttatgga gacgcttgaa cagcatctaa atacattaga aggaaagaaa cctggaaaca
901aatctggtgc tccctctcca ttaagtaagt cttctccagc cacaactgtt acgtctccta
961attctacacc agctaaaact attgacacat ccccaccggt tgatttattt gcaactgcat
1021ctgcggctgt cccagtcagc acttctaaac catctagtga tctcctggac ctccagccag
1081acttttcctc tggaggggca gcagcagccg cagcaccagc accaccacca cctgctggag
1141gagccactgc atggggagga tttgggggtt ctttcatggc gccttcccca tctccagtga
1201ctccagctca gaataacctg ctacagccca attttgaggc agcttttggg acaacgcctt
1261caacttccag cagcagctcc tttgatccat cagtgtttga tggtctaggt gatcttttga
1321tgccaaccat ggcaccagct gggcagcctg cacctgtctc aatggtacca cccagtcctg
1381caatggcagc cagcaaagcc cttggaagtg atcttgattc aTCTCTTGCC AGCTTAGTAG
1441GCAATCTTGG AATTTCTGGT ACCACAACAA AAAAGGGAGA TCTTCAGTGG AATGCTGGAG
1501AGAAAAAGTT GACTGGTGGA GCCAACTGGC AGCCTAAAGT AGCTCCAGCA ACCTGGTCAG
1561CAGGCGTTCC ACCAAGTGCA CCTTTGCAAG GAGCTGTACC TCCAACCAGT TCAGTTCCTC
1621CTGTTGCCGG GGCCCCATCG GTTGGACAAC CTGGAGCAGG ATTTGGAATG CCTCCTGCTG
1681GGACAGGCAT GCCCATGATG CCTCAGCAGC CGGTCATGTT TGCACAGCCC ATGATGAGGC
1741CCCCCTTTGG AGCTGCCGCT GTACCTGGCA CGCAGCTTTC TCCAAGCCCT ACACCTGCCA
1801GTCAGAGTCC CAAGAAACCT CCAGCAAAGG ACCCATTAGC GGATCTTAAC ATCAAGGATT
1861TCTTGTACCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC
1921TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGTA ACTTGAAAGT ATTTCGATTT
1981CTTGGCTTTA TATATCTTGT GGAAAGGACG AGGCGATTGT AATACATTAT ATCACACGCG
2041TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt

Download FASTA (ORF) (Full)