Construct: ORF TRCN0000473858

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004557.1_s317c1
Derived from:
ccsbBroadEn_10493
DNA Barcode:
GACTCTAACGAATGTATACCTGAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF137P (7696)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473858
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 107987264 LOC107987264 putative zinc finger protei... XR_002958390.1 52% (many diffs)
2 human 344787 ZNF860 zinc finger protein 860 NM_001137674.3 26.9% 20% (many diffs)
3 human 344787 ZNF860 zinc finger protein 860 XM_017006299.1 26.9% 20% (many diffs)
4 human 7696 ZNF137P zinc finger protein 137, ps... NR_023311.1 24.8% (many diffs)
5 human 55762 ZNF701 zinc finger protein 701 XR_001753718.2 18.1% (many diffs)
6 human 79986 ZNF702P zinc finger protein 702, ps... NR_003578.1 18% (many diffs)
7 human 55762 ZNF701 zinc finger protein 701 XR_001753717.2 15.3% (many diffs)
8 human 55762 ZNF701 zinc finger protein 701 XR_001753715.2 15.2% (many diffs)
9 human 55762 ZNF701 zinc finger protein 701 XR_001753716.2 14.3% (many diffs)
10 human 388558 ZNF808 zinc finger protein 808 XR_935832.3 12.6% (many diffs)
11 human 388558 ZNF808 zinc finger protein 808 XR_002958314.1 12% (many diffs)
12 human 90333 ZNF468 zinc finger protein 468 NR_102301.2 11.6% (many diffs)
13 human 90333 ZNF468 zinc finger protein 468 NR_102300.2 11.3% (many diffs)
14 human 90333 ZNF468 zinc finger protein 468 NR_102299.2 11.3% (many diffs)
15 human 7576 ZNF28 zinc finger protein 28 NR_163139.1 10.9% (many diffs)
16 human 170958 ZNF525 zinc finger protein 525 NR_145445.2 10.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
690
ORF length:
621
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaatgtggca aggtttttag tagaaaagca caccttgcat gtcatcatag
121acttcatact gtctaaggtt tctaatcaac aatcaaacct tgcacaacat cagagagttt
181atactggaga gaaaCCTTAC AAGTGTAATG AGTGGGGCAA AGCCTTAAGT GGGAAGTCGT
241CACTTTTTTA TCATCAAGCA ATCCATGGTG TAGGGAAACT TTGCAAATGT AATGATTGTC
301ACAAAGTCTT CAGTAATGCT ACAACCATTG CAAATCACTG GAGAATCCGT AATGAAGACA
361GATCTTACAA GTGTAATAAA TGTGGTAAAA TTTTCAGACA TCAATCATAT CTTGCAGTTT
421ATCAGCGAAC TCATACTGGA GAGAAACCTT ACAAATATCA TGACTGTGGC AAGGTCTTCA
481GTCAAGCTTC ATCCTATGCA AAACATAGGA GAATTCATAC AGGAGAGAAA CCTCACAAGT
541GTGATGATTG TGGCAAAGTC TTGACTTCAC GTTCACACCT CATTAGACAT CAGAGAATCC
601ATACTGGACA TAAATCTTAC AAATGTCTTA AGTGTGGCAA GGTCTTCAGT CTGTGGGCAC
661TCCATGCAGA ACATCAGAAA ATTCATTTTT TGCCAACTTT CTTGTACAAA GTGGTTGATA
721TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
781CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGAGACTC
841TAACGAATGT ATACCTGACA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
901tgaaagatt

Download FASTA (ORF) (Full)