Construct: ORF TRCN0000474396

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018844.3_s317c1
Derived from:
ccsbBroadEn_14562
DNA Barcode:
TAATTGTTATTCACCCAAGAGACT
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
CAMK2A (815)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474396
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 815 CAMK2A calcium/calmodulin dependen... NM_001363990.1 99.7% 47.9% (many diffs)
2 human 815 CAMK2A calcium/calmodulin dependen... NM_171825.2 99.7% 47.9% (many diffs)
3 human 815 CAMK2A calcium/calmodulin dependen... NM_001369025.2 99.6% 47.9% (many diffs)
4 human 815 CAMK2A calcium/calmodulin dependen... NM_001363989.1 97.4% 46.8% (many diffs)
5 human 815 CAMK2A calcium/calmodulin dependen... NM_015981.4 97.4% 46.8% (many diffs)
6 human 816 CAMK2B calcium/calmodulin dependen... NM_172083.3 79.9% 43.4% (many diffs)
7 human 816 CAMK2B calcium/calmodulin dependen... XM_005249864.3 77.6% 42.1% (many diffs)
8 human 816 CAMK2B calcium/calmodulin dependen... XM_017012665.1 77.5% 42.1% (many diffs)
9 human 816 CAMK2B calcium/calmodulin dependen... NM_172081.3 76.1% 41.3% (many diffs)
10 human 816 CAMK2B calcium/calmodulin dependen... XM_017012664.1 76% 41.4% (many diffs)
11 human 816 CAMK2B calcium/calmodulin dependen... NM_172084.3 75.3% 46.3% (many diffs)
12 human 816 CAMK2B calcium/calmodulin dependen... XM_006715784.2 74.2% 40.1% (many diffs)
13 human 816 CAMK2B calcium/calmodulin dependen... NM_172079.2 74.1% 40.1% (many diffs)
14 human 817 CAMK2D calcium/calmodulin dependen... XM_006714330.3 74% 44.9% (many diffs)
15 human 816 CAMK2B calcium/calmodulin dependen... NM_172080.3 74% 40.2% (many diffs)
16 human 817 CAMK2D calcium/calmodulin dependen... NM_172128.3 73.4% 43.9% (many diffs)
17 human 817 CAMK2D calcium/calmodulin dependen... NM_001321576.2 73.3% 44% (many diffs)
18 human 817 CAMK2D calcium/calmodulin dependen... XM_017008678.2 73.1% 44% (many diffs)
19 human 816 CAMK2B calcium/calmodulin dependen... XM_005249862.3 72.9% 39.4% (many diffs)
20 human 817 CAMK2D calcium/calmodulin dependen... NM_001321582.2 72.4% 42.9% (many diffs)
21 human 817 CAMK2D calcium/calmodulin dependen... NM_001321575.2 72.4% 43.6% (many diffs)
22 human 817 CAMK2D calcium/calmodulin dependen... NM_001321577.2 72.3% 43.7% (many diffs)
23 human 817 CAMK2D calcium/calmodulin dependen... XM_011532291.2 72.2% 42.9% (many diffs)
24 human 817 CAMK2D calcium/calmodulin dependen... NM_001321583.2 72.2% 43.6% (many diffs)
25 human 817 CAMK2D calcium/calmodulin dependen... XM_017008677.2 72.1% 43.7% (many diffs)
26 human 817 CAMK2D calcium/calmodulin dependen... NM_001321590.2 71.6% 42.6% (many diffs)
27 human 817 CAMK2D calcium/calmodulin dependen... NM_001321584.2 71.5% 42.7% (many diffs)
28 human 817 CAMK2D calcium/calmodulin dependen... NM_001321568.2 71.5% 42.7% (many diffs)
29 human 817 CAMK2D calcium/calmodulin dependen... NM_001321589.2 71.3% 42.6% (many diffs)
30 human 816 CAMK2B calcium/calmodulin dependen... NM_001293170.2 71% 38.3% (many diffs)
31 human 816 CAMK2B calcium/calmodulin dependen... NM_172078.3 71% 38.3% (many diffs)
32 human 817 CAMK2D calcium/calmodulin dependen... NM_001321587.2 70.6% 41.7% (many diffs)
33 human 816 CAMK2B calcium/calmodulin dependen... NM_172082.3 70.5% 42.2% (many diffs)
34 human 817 CAMK2D calcium/calmodulin dependen... NM_001221.4 70.4% 42% (many diffs)
35 human 817 CAMK2D calcium/calmodulin dependen... NM_001321591.2 70.4% 41.7% (many diffs)
36 human 817 CAMK2D calcium/calmodulin dependen... NM_001321574.2 70.4% 42.1% (many diffs)
37 human 817 CAMK2D calcium/calmodulin dependen... XM_011532295.2 70.4% 42.1% (many diffs)
38 human 817 CAMK2D calcium/calmodulin dependen... NM_001321572.2 70.1% 41.9% (many diffs)
39 human 817 CAMK2D calcium/calmodulin dependen... XM_017008674.2 70.1% 42% (many diffs)
40 human 817 CAMK2D calcium/calmodulin dependen... NM_001321567.2 69.9% 41.9% (many diffs)
41 human 817 CAMK2D calcium/calmodulin dependen... XM_011532289.2 69.5% 41.1% (many diffs)
42 human 817 CAMK2D calcium/calmodulin dependen... XM_017008672.2 69.5% 41.9% (many diffs)
43 human 817 CAMK2D calcium/calmodulin dependen... XM_011532290.2 69.5% 41.2% (many diffs)
44 human 817 CAMK2D calcium/calmodulin dependen... XM_017008673.2 69.5% 41.9% (many diffs)
45 human 817 CAMK2D calcium/calmodulin dependen... NM_001321570.2 69.3% 41% (many diffs)
46 human 817 CAMK2D calcium/calmodulin dependen... NM_001321586.2 69.2% 41% (many diffs)
47 human 817 CAMK2D calcium/calmodulin dependen... NM_001321579.2 69.1% 41% (many diffs)
48 human 817 CAMK2D calcium/calmodulin dependen... NM_001321566.2 68.7% 40.9% (many diffs)
49 human 817 CAMK2D calcium/calmodulin dependen... NM_001321588.2 68.7% 41% (many diffs)
50 human 817 CAMK2D calcium/calmodulin dependen... NM_001321580.2 68.4% 40.4% (many diffs)
51 human 817 CAMK2D calcium/calmodulin dependen... NM_001321573.2 67.9% 40% (many diffs)
52 human 817 CAMK2D calcium/calmodulin dependen... NM_001321571.2 67.4% 40.3% (many diffs)
53 human 817 CAMK2D calcium/calmodulin dependen... XM_005263254.4 67.4% 40.4% (many diffs)
54 human 817 CAMK2D calcium/calmodulin dependen... NM_001321569.2 66.7% 39.3% (many diffs)
55 human 817 CAMK2D calcium/calmodulin dependen... XM_005263253.4 66.6% 39.4% (many diffs)
56 human 816 CAMK2B calcium/calmodulin dependen... XM_017012662.1 63.7% 34.4% (many diffs)
57 human 816 CAMK2B calcium/calmodulin dependen... XM_024446945.1 61.5% 33.1% (many diffs)
58 human 816 CAMK2B calcium/calmodulin dependen... XM_006715781.2 61.2% 33.2% (many diffs)
59 human 816 CAMK2B calcium/calmodulin dependen... XM_017012661.1 58.7% 31.7% (many diffs)
60 human 816 CAMK2B calcium/calmodulin dependen... XM_011515556.1 58.2% 31.4% (many diffs)
61 human 816 CAMK2B calcium/calmodulin dependen... XM_011515557.1 58.2% 31.5% (many diffs)
62 human 816 CAMK2B calcium/calmodulin dependen... NM_001220.5 58% 31.2% (many diffs)
63 human 816 CAMK2B calcium/calmodulin dependen... XM_011515555.1 58% 31.2% (many diffs)
64 human 816 CAMK2B calcium/calmodulin dependen... XM_011515553.1 57.6% 30.9% (many diffs)
65 human 816 CAMK2B calcium/calmodulin dependen... XM_017012660.1 57.4% 31% (many diffs)
66 human 816 CAMK2B calcium/calmodulin dependen... XM_011515554.1 57.3% 31% (many diffs)
67 human 816 CAMK2B calcium/calmodulin dependen... XM_011515551.1 56.4% 30.3% (many diffs)
68 human 816 CAMK2B calcium/calmodulin dependen... XM_011515550.1 56.3% 30.3% (many diffs)
69 human 816 CAMK2B calcium/calmodulin dependen... XM_011515552.1 56.2% 30.4% (many diffs)
70 human 816 CAMK2B calcium/calmodulin dependen... XM_011515549.1 55.5% 29.9% (many diffs)
71 human 816 CAMK2B calcium/calmodulin dependen... XM_017012670.2 54.7% 18.7% (many diffs)
72 human 816 CAMK2B calcium/calmodulin dependen... XM_011515547.1 54.5% 29.3% (many diffs)
73 human 816 CAMK2B calcium/calmodulin dependen... XM_017012669.2 53.5% 18.1% (many diffs)
74 human 816 CAMK2B calcium/calmodulin dependen... XM_017012668.2 53.3% 18.1% (many diffs)
75 human 816 CAMK2B calcium/calmodulin dependen... XM_024446946.1 53.2% 18.2% (many diffs)
76 human 816 CAMK2B calcium/calmodulin dependen... XM_017012667.2 52.4% 17.8% (many diffs)
77 human 816 CAMK2B calcium/calmodulin dependen... XM_017012666.2 51.2% 17.3% (many diffs)
78 human 816 CAMK2B calcium/calmodulin dependen... XM_017012663.2 40.6% 13.7% (many diffs)
79 human 816 CAMK2B calcium/calmodulin dependen... XM_011515559.2 39.3% 13.2% (many diffs)
80 mouse 12322 Camk2a calcium/calmodulin-dependen... NM_177407.4 92.8% 47.9% (many diffs)
81 mouse 12322 Camk2a calcium/calmodulin-dependen... XM_017317805.2 92.8% 47.9% (many diffs)
82 mouse 12322 Camk2a calcium/calmodulin-dependen... XM_006525541.4 90.8% 46.8% (many diffs)
83 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514479.2 76.2% 41.3% (many diffs)
84 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514476.1 74% 40.1% (many diffs)
85 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514477.1 74% 40.2% (many diffs)
86 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514475.1 73% 39.4% (many diffs)
87 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314240.1 72.9% 39.3% (many diffs)
88 mouse 12323 Camk2b calcium/calmodulin-dependen... NM_001174054.1 72.5% 39.3% (many diffs)
89 mouse 12323 Camk2b calcium/calmodulin-dependen... NM_007595.5 71% 38.3% (many diffs)
90 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314239.1 70.9% 38.3% (many diffs)
91 mouse 12323 Camk2b calcium/calmodulin-dependen... NM_001174053.1 70.3% 38.1% (many diffs)
92 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514469.2 61.4% 33.1% (many diffs)
93 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514470.3 61.3% 33.2% (many diffs)
94 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514467.2 60% 32.3% (many diffs)
95 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314238.1 59.9% 32.4% (many diffs)
96 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314237.1 59.2% 31.9% (many diffs)
97 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514465.2 58% 31.2% (many diffs)
98 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514464.2 57.9% 31.1% (many diffs)
99 mouse 12322 Camk2a calcium/calmodulin-dependen... NM_001286809.1 35.8% 14.3% (many diffs)
100 mouse 12322 Camk2a calcium/calmodulin-dependen... NM_009792.3 35% 12.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
759
ORF length:
690
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggccaccatc acctgcaccc gcttcacgga agagtaccag ctcttcgagg
121aattgggcaa gggagccttc tcggtggtgc gaaggtgtgt gaaggtgctg gctggccagg
181agtatgctgc caagatcatc aacacaaaga agctgtcagc cagagaccat cagaagctgg
241agcgtgaagc ccgcatctgc cgcctgctga agcaccccaa catcgtccga ctacatgaca
301gcatctcaga ggagggacac cactacctga tcttcgacct ggtcactggt ggggaactgt
361ttgaagatat cgtggcccgg gagtattaca gtgaggcgga tgccagtcac tgtatccagc
421agatcctgga ggctgtgctg cactgccacc agatgggggt ggtgcaccgg gacctgaagc
481ctgagaatct gttgctggcc tccaagctca agggtgccgc agtgaagctg gcagactttg
541gcctggccat agaggtggag ggggagcagc aggcatggtt tgggtttgca gggactcctg
601gatatctctc cccagaagtg ctgcggaagg acccgtacgg gaagcctgtg gacctgtggg
661cttgtggggt catcctgtac atcctgctgg ttgggtaccc cccgttctgg gatgaggacc
721agcaccgcct gtaccagcag atcaaagccg gcgccttatg atttcccatc gccggaatgg
781gacactgtca ccccggaagc caaggatctg atcaataaga tgctgaccat taacccatcc
841aaacgcatca cagctgccga agccattaag cacccctgga tctcgcaccg ctccaccgtg
901gcatcgtgca tgcacagaca ggagaccgtg gactgcctga agaagttcaa tgccaggagg
961aaactgaagg gagccattct caccacgatg ctggccacca ggaacttctc cggagggaag
1021agtgggggaa acaagaagag cgatggtgtg aaggaatcct cagagagcac caacaccacc
1081atcgaggatg aagacaccaa agtgcggaaa caggaaatta taaaagtgac agagcagctg
1141attgaagcca taagcaatgg agatttTGAG TCCTACACGA AGATGTGCGA CCCTGGCATG
1201ACAGCCTTCG AACCTGAGGC CCTGGGGAAC CTGGTTGAGG GCCTGGACTT CCATCGATTC
1261TATTTTGAAA ACCTGTGGTC CCGGAACAGC AAGCCCGTGC ACACCACCAT CCTGAATCCC
1321CACATCCACC TGATGGGCGA CGAGTCAGCC TGCATCGCCT ACATCCGCAT CACGCAGTAC
1381CTGGACGCTG GCGGCATCCC ACGCACCGCC CAGTCGGAGG AGACCCGTGT CTGGCACCGC
1441CGGGACGGCA AATGGCAGAT CGTCCACTTC CACAGATCTG GGGCGCCCTC CGTCCTGCCC
1501CACTTGCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC
1561CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT
1621TGGCTTTATA TATCTTGTGG AAAGGACGAT AATTGTTATT CACCCAAGAG ACTACGCGTT
1681AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)

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