Construct: ORF ccsbBroad304_05120

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006319.1_s304c1, BRDN0000405358
Derived from:
ccsbBroadEn_05120
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF320 (162967)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05120
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 162967 ZNF320 zinc finger protein 320 NM_001351773.1 100% 100%
2 human 162967 ZNF320 zinc finger protein 320 NM_001351774.2 100% 100%
3 human 162967 ZNF320 zinc finger protein 320 NM_001351775.2 100% 100%
4 human 162967 ZNF320 zinc finger protein 320 NM_001351776.2 100% 100%
5 human 162967 ZNF320 zinc finger protein 320 NM_207333.3 100% 100%
6 human 162967 ZNF320 zinc finger protein 320 XR_002958279.1 62.2% 1_201del;1729_2454del
7 human 162967 ZNF320 zinc finger protein 320 XR_002958278.1 62% 1_208del;1736_2461del
8 human 162967 ZNF320 zinc finger protein 320 XR_002958277.1 61.3% 1_237del;1765_2490del
9 human 7576 ZNF28 zinc finger protein 28 NM_006969.5 60% 52.3% (many diffs)
10 human 7576 ZNF28 zinc finger protein 28 XM_011527262.2 60% 52.3% (many diffs)
11 human 162967 ZNF320 zinc finger protein 320 XR_002958275.1 59.2% 1_324del;1852_2577del
12 human 162967 ZNF320 zinc finger protein 320 XR_002958276.1 59.1% 1_328del;1856_2581del
13 human 7576 ZNF28 zinc finger protein 28 NM_001369764.1 58.3% 50.8% (many diffs)
14 human 162967 ZNF320 zinc finger protein 320 XR_001753616.2 56.1% 1_467del;1995_2720del
15 human 344787 ZNF860 zinc finger protein 860 NM_001137674.3 50.9% 47.8% (many diffs)
16 human 344787 ZNF860 zinc finger protein 860 XM_017006299.1 50.9% 47.8% (many diffs)
17 human 55762 ZNF701 zinc finger protein 701 XR_001753715.2 36.4% (many diffs)
18 human 55762 ZNF701 zinc finger protein 701 XR_001753716.2 34.3% (many diffs)
19 human 90333 ZNF468 zinc finger protein 468 NR_102301.2 28.6% (many diffs)
20 human 90333 ZNF468 zinc finger protein 468 NR_102300.2 28% (many diffs)
21 human 90333 ZNF468 zinc finger protein 468 NR_102299.2 27.9% (many diffs)
22 human 7576 ZNF28 zinc finger protein 28 NR_163139.1 26.4% (many diffs)
23 human 7576 ZNF28 zinc finger protein 28 NM_001369761.1 15.2% 12.4% (many diffs)
24 human 7576 ZNF28 zinc finger protein 28 NM_001369766.1 15.1% 12.2% (many diffs)
25 human 90333 ZNF468 zinc finger protein 468 NM_001277120.2 15% 10.6% (many diffs)
26 human 162967 ZNF320 zinc finger protein 320 XM_024451399.1 14.1% 11% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1596
ORF length:
1527
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggctctttct cagggtctac tgacattcag ggatgtggcc atagaattct
121ctcaggagga gtggaaatgc ctggaccctg ctcagaggac tctatacaga gacgtgatgc
181tggagaatta taggaacctg gtctccctgg atatctcttc caaatgcatg atgaatacat
241tgtcatcaac agggcaaggc aatacagaag tgatccacac agggacattg cagagacaag
301caagttatca cattggagca ttttgctccc aggaaattga gaaagacatt catgactttg
361tgtttcagtg gcaagaagat gaaacaaatg accatgaagc acccatgaca gaaataaaaa
421agttgactag tagtacagac cgatatgatc aaaggcatgc tggaaacaag cctattaaag
481gtcagcttga atcaagattt catttgcatt tgcgaagaca taggagaatt catactggag
541agaaacctta caaatgtgaa gaatgtgaga aagttttcag ttgcaaatca catcttgaaa
601tacataggat aattcatact ggagagaaac catacaaatg taaggtttgc gacaaggctt
661ttaagcatga ttcacacctg gcaaaacata ctagaattca caggggagac aaacattaca
721catgtaatga atgtggcaag gtttttgatc aaaaagcaac ccttgcatgt catcatagaa
781gtcatactgg agagaaacct tataagtgta atgagtgtgg caagaccttt agtcagacat
841cacaccttgt gtaccatcat agactgcata ctggagagaa accttacaaa tgtaatgagt
901gtggcaagac cttcgctcga aattcagtcc tcgtaattca taaggcagtt catactgcag
961agaaacccta taagtgtaat gaatgtggca aggtttttaa gcaacgagca actcttgcag
1021gacatcgtag agttcacact ggagagaaac cttacagatg tgaagaatgc gacaaagttt
1081tcagtcgcaa atcacatctt gaaagacata ggaggattca tactggagag aaaccataca
1141aatgtaaggt ttgtgacaag gctttccgga gtgattcacg tcttgcagaa catcagagag
1201ttcatactgg agagagacct tacacatgta atgaatgtgg caaggttttt agtacaaaag
1261cgtacctcgc atgtcatcaa aaacttcata ctggagagaa actttacgaa tgtgaagaat
1321gtgacaaagt ttacattcgc aaatcacacc ttgaaagaca taggaggatt catacaggag
1381agaaacctca caagtgtggt gattgtggta aagcctttaa ttcaccttca caccttatta
1441ggcatcagag aatccatact ggacagaaat cttacaaatg tcatcagtgt ggcaaggtct
1501ttagtctgag gtcactcctt gcagaacatc agaaaattcc ttttggagac aattgtttca
1561agtgcaatga gtatagcaaa ccatcaagca ttaatttgcc aactttcttg tacaaagtgg
1621ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
1681ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

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