Construct: ORF ccsbBroadEn_09689

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013184.1_s300c1, BRDN0000396043
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF595 (152687)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 152687 ZNF595 zinc finger protein 595 NM_182524.4 99.8% 99.6% 348C>T;895C>A;1189A>G
2 human 152687 ZNF595 zinc finger protein 595 NM_001286052.1 94.9% 94.7% (many diffs)
3 human 152687 ZNF595 zinc finger protein 595 XM_011513398.2 94.9% 94.7% (many diffs)
4 human 152687 ZNF595 zinc finger protein 595 NM_001286053.1 71.6% 71.4% 0_1ins549;346C>A;640A>G
5 human 152687 ZNF595 zinc finger protein 595 NM_001286054.1 71.6% 71.4% 0_1ins549;346C>A;640A>G
6 human 7700 ZNF141 zinc finger protein 141 NM_003441.4 63.2% 54.2% (many diffs)
7 human 255403 ZNF718 zinc finger protein 718 NM_001039127.6 63.2% 54.6% (many diffs)
8 human 7700 ZNF141 zinc finger protein 141 XM_017008591.2 57.9% 49.5% (many diffs)
9 human 7700 ZNF141 zinc finger protein 141 XM_011513562.3 54% 46.2% (many diffs)
10 human 7700 ZNF141 zinc finger protein 141 NM_001348277.2 52.4% 44.2% (many diffs)
11 human 7700 ZNF141 zinc finger protein 141 NM_001348278.2 27.6% 23.3% (many diffs)
12 human 7700 ZNF141 zinc finger protein 141 NM_001348280.2 12.6% 10.4% (many diffs)
13 human 107986244 LOC107986244 zinc finger protein 141-like XM_017008889.1 10.4% 9.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2010
ORF length:
1944
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA ACTCGTAACA TTCAGGGATG TGGCCATAGA ATTCTCCCCT GAAGAGTGGA
121AATGTCTGGA CCCTGCCCAG CAGAATTTGT ATAGAGATGT GATGTTGGAG AACTACAGGA
181ACCTGGTCTC CCTGGGTTTT GTGATCTCTA ACCCAGACCT GGTCACCTGT CTGGAGCAAA
241TAAAAGAGCC CTGCAATTTG AAGATACATG AGACAGCAGC CAAACCCCCA GCTATATGTT
301CTCCTTTCAG CCAAGACCTT TCACCAGTGC AGGGGATAGA AGATTCATTC CACAAACTTA
361TACTGAAAAG ATACGAGAAA TGTGGACATG AGAATTTACA ATTAAGAAAA GGTTGTAAAC
421GTGTGAATGA GTGTAAGGTG CAGAAAGGAG TTAATAATGG AGTTTACCAG TGCTTGTCAA
481CTACCCAGAG CAAAATATTT CAATGTAATA CATGTGTTAA AGTTTTTAGT AAATTTTCAA
541ATTCAAACAA ACATAAGATA AGACATACTG GAGAGAAACC CTTTAAATGT ACAGAATGTG
601GCAGATCGTT TTACATGTCA CACCTAACTC AACATACAGG AATTCATGCT GGAGAGAAAC
661CCTACAAATG TGAAAAATGT GGCAAAGCCT TTAATAGGTC CACATCACTT AGTAAACATA
721AGAGAATTCA TACTGGAGAG AAACCCTACA CATGTGAAGA ATGTGGCAAA GCCTTTAGAC
781GGTCCACAGT TCTGAACGAA CATAAGAAAA TTCATACTGG AGAGAAACCC TACAAATGTG
841AAGAATGTGG CAAAGCCTTT ACAAGGTCCA CAACACTGAA TGAACACAAG AAAATTCATA
901CTGGAGAGAA ACCCTACAAA TGTAAAGAAT GTGGCAAAGC CTTTAGATGG TCCACAAGCA
961TGAATGAACA TAAGAATATT CATACTGGAG AGAAACCCTA CAAATGTAAA GAATGTGGCA
1021AAGCCTTTAG ACAGTCCAGG AGCCTGAATG AACATAAAAA TATTCATACT GGCGAAAAAC
1081CCTACACATG TGAAAAATGT GGCAAAGCTT TTAACCAATC CTCAAGTCTT ATTATACACA
1141GGAGCATTCA TTCTGAACAA AAACTTTACA AATGTGAAGA ATGTGGCAAA GCCTTTACTT
1201GGTCCTCATC CCTTAATAAA CATAAGAGAA TTCATACTGG AGAGAAACCC TACGCATGTG
1261AAGAATGTGG CAAAGCTTTT TATAGGTCCT CACACCTTGC TAAACATAAG AGAATTCATA
1321CTGGAGAGAA ACCCTACACG TGCGAAGAAT GTGGCAAAGC TTTTAACCAA TCCTCAACTC
1381TTATATTACA CAAGAGAATC CATTCTGGGC AAAAACCTTA CAAATGTGAA GAATGTGGCA
1441AAGCCTTTAC ACGGTCCACA ACACTGAACG AACATAAGAA AATTCATACT GGCGAGAAAC
1501CCTACAAATG TGAAGAATGT GGCAAAGCTT TCATATGGTC CGCAAGCCTG AATGAACATA
1561AGAATATTCA TACTGGAGAG AAACCCTACA AATGTAAAGA ATGTGGCAAA GCTTTTAACC
1621AATCCTCAGG CCTTATTATA CACAGGAGCA TTCATTCTGA ACAAAAACTT TACAAATGTG
1681AAGAATGTGG CAAAGCCTTT ACTCGGTCCA CAGCCCTGAA TGAACATAAG AAAATTCATT
1741CTGGAGAGAA ACCCTACAAA TGCAAAGAAT GTGGCAAAGC CTATAACTTA TCCTCAACCC
1801TTACTAAACA TAAGAGAATT CATACTGGAG AGAAACCCTT CACATGTGAA GAATGTGGCA
1861AAGCCTTCAA TTGGTCCTCA TCCCTTACTA AACATAAGAT AATTCATACT GGAGAGAAAT
1921CCTACAAATG TGAAGAATGT GGCAAAGCTT TTAATCGGCC CTCAACCCTT ACTGTACACA
1981AGCGAATTCA TACTGGCAAG GAACATAGTT GCCCAACTTT CTTGTACAAA GTtggcatta
2041taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)

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