Construct: ORF ccsbBroadEn_15067

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014825.1_s300c1, BRDN0000457177
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
ZNF107 (51427)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51427 ZNF107 zinc finger protein 107 NM_001013746.3 99.9% 97.9% 2298_2299insA;2337G>A
2 human 51427 ZNF107 zinc finger protein 107 NM_016220.5 99.9% 97.9% 2298_2299insA;2337G>A
3 human 51427 ZNF107 zinc finger protein 107 XM_017012283.2 99.9% 97.9% 2298_2299insA;2337G>A
4 human 51427 ZNF107 zinc finger protein 107 XM_017012285.2 99.9% 97.9% 2298_2299insA;2337G>A
5 human 51427 ZNF107 zinc finger protein 107 XM_017012286.1 99.9% 97.9% 2298_2299insA;2337G>A
6 human 51427 ZNF107 zinc finger protein 107 NM_001282360.1 95% 92.7% (many diffs)
7 human 51427 ZNF107 zinc finger protein 107 NM_001282359.1 91.8% 90% 1_207del;2505_2506insA;2544G>A
8 human 440519 ZNF724 zinc finger protein 724 NM_001355405.2 60.9% 53.2% (many diffs)
9 human 440519 ZNF724 zinc finger protein 724 XM_024451520.1 60.9% 53.2% (many diffs)
10 human 7639 ZNF85 zinc finger protein 85 NM_001256173.1 57.5% 49.7% (many diffs)
11 human 7639 ZNF85 zinc finger protein 85 XM_011528264.1 56.9% 49% (many diffs)
12 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 56.7% 49.5% (many diffs)
13 human 168374 ZNF92 zinc finger protein 92 NM_007139.4 56.3% 48.9% (many diffs)
14 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 56.3% 49.2% (many diffs)
15 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 53.2% 45.9% (many diffs)
16 human 109504726 ERV3-1-ZNF117 ERV3-1-ZNF117 readthrough NM_001348050.2 52% 44.9% (many diffs)
17 human 51351 ZNF117 zinc finger protein 117 NM_015852.4 52% 44.9% (many diffs)
18 human 170959 ZNF431 zinc finger protein 431 NM_001319126.2 51.8% 43.4% (many diffs)
19 human 170959 ZNF431 zinc finger protein 431 NM_001319127.2 51.7% 43.8% (many diffs)
20 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 51.4% 43.8% (many diffs)
21 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 50.6% 43.1% (many diffs)
22 human 163227 ZNF100 zinc finger protein 100 NM_001351671.2 48.1% 39.8% (many diffs)
23 human 170959 ZNF431 zinc finger protein 431 NM_133473.4 46.4% 39.3% (many diffs)
24 human 170959 ZNF431 zinc finger protein 431 NM_001319124.2 46.4% 39.3% (many diffs)
25 human 170959 ZNF431 zinc finger protein 431 XM_011527750.2 45.6% 38.6% (many diffs)
26 human 646864 ZNF723 zinc finger protein 723 NM_001349726.2 44.7% 38.4% (many diffs)
27 human 646864 ZNF723 zinc finger protein 723 XM_024451652.1 44.7% 38.4% (many diffs)
28 human 163227 ZNF100 zinc finger protein 100 NM_001351669.2 42.7% 35.3% (many diffs)
29 human 163227 ZNF100 zinc finger protein 100 NM_173531.4 42.6% 35.2% (many diffs)
30 human 163227 ZNF100 zinc finger protein 100 NM_001351672.2 36.3% 30.4% (many diffs)
31 human 7697 ZNF138 zinc finger protein 138 NM_001367572.1 27.7% 23.7% (many diffs)
32 human 7697 ZNF138 zinc finger protein 138 NM_001271639.2 25.8% 22.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2400
ORF length:
2334
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGT AGCCAAACCC CCAGTAATGT CTTTTCATTT TGCCCAAGAC CTTTGGCCAG
121AGCAGAACAT AAAAGATTCT TTCCAGAAAG TGACACTGAG AAGATACGGA AAATGTGAAT
181ATGAGAATTT ACAGTTAAGA AAAGGCTGTA AACATGTGGA TGAGTGTACG GGGCACAAAG
241GAGGTCATAA TACAGTTAAC CAATGTTTGA CAGCTACCCC AAGCAAAATA TTCCAGTGTA
301ATAAATATGT GAAAGTCTTT GATAAATTTT CAAATTCAAA TAGATATAAG AGAAGACATA
361CAGGAAACAA ACACTTCAAA TGTAAAGAAT GTAGCAAATC ATTTTGCGTG CTTTCACAAC
421TAACTCAGCA TAGAAGAATT CATACTAGAG TGAATTCCTA CAAATGTGAA GAATGTGGAA
481AAGCCTTTAA CTGGTTCTCA ACTCTTACTA AACATAAGAG AATTCATACT GGAGAAAAGC
541CCTACAAATG TGAAGAATGT GGCAAAGCCT TTAACCAGTC CTCACAACTT ACTAGGCATA
601AGATAATTCA TACTGAAGAG AAACCCAACA AATGTGAAGA ATGTGGCAAG GCCTTTAAAC
661AGGCCTCACA CCTTACTATA CATAAAATAA TTCATACTGG AGAaaaacct tacaaatatg
721aagaatgtgg caaagtcttt agccagtcct cacaccttac tacacaaaag atacttcaca
781ctggagagaa cctctacaag tgtaaagaat gtggaaaagc ttttaaccta ttctcaaatc
841ttactaacca taagagaatt catgctgggg agaaacccta caaaTGTAAA GAATGTGGCA
901GAGCTTTTAA CATATCCTCA AACCTTAATA AACAGGAGAA AATTCATACT GGAGGGAAAC
961TCAACAAATG TGAAGAATGT GACAAAGCTT TTAACCGATC CTTAAAACTT ACTGCACATA
1021AGAAAATTCT AATGGAAGAG AAACCCTACA AATGTGAAGA ATGTGGCAAA GTCTTTAACC
1081AGTTCTCAAC TCTTACTAGA CATAAGATAA TTCATACTGG AGAGAAACCC TACAAATGTA
1141AAGAATGTGG CAAAGCTTTT AACCAATCTT CAAACCTTAC TGAACATAAG AAAATTCATA
1201CTGCAGAGAA ATCCTATAAA TGTGAAGAAT GTGGCAAAGC TTTTAACCAA CACTCAAACC
1261TAATTAACCA TAGGAAAATT TATTCTGGAG AGAAACCATA CAAATGTGAA GAATGTGGAA
1321AAGCTTTTAA TCGATCCTCA ACCCTTACTA GACATAAGAA AATTCATACT GGAGAGAAAC
1381CCTACAAATG TGAAGAATGT GACAGAGCTT TTAGCCAGTC TTCAAACCTT ACTGAACATA
1441AGAAAATTCA TACTGGAGAG AAACCCTATA AATGTGAGGA ATGTGGCAAA GCTTTTAACC
1501GATTCTCAAC CCTTACTAAA CATAAGAGAA TTCATACTGG AGAAAAACCC TATAAATGTG
1561AAGAATGTGG AAAAGCCTTT AATCAATCCT ATCAACTTAC TAGACATAAG ATAGTTCATA
1621CTAAAGAGAA ACTCAACAAA TGTGAAGAAT TTGGCAAGGC CTTTAAACAG TCCTCACACC
1681GTACTATACA TAAAATTATT CATACTGGAG AGAAACCCTA CAAATGTGAA GAACATGGCA
1741AAGTTTTTAA CCAGTCCTCA AACCTTACTA CACAAAAGAT AATTCATACT GGAGAGAACC
1801TCTACAAATT TGAAGAACAT GGAAAAGCTT TTAACCTATT CTCAAACATT ACTAACCATA
1861AGATAATTTA TACTGGAGAG AAACCCCACA AATGTGAAGA ATGTGGAAAA GCTTATAACC
1921GATTCTCAAA CCTAACTATA CATAAGAGAA TTCATACGGG AGAGAAACCT TACCAATGTG
1981CAGAATGTGG CAAAGCCTTT AACTGCTCCT CAACCCTTAA TAGACATAAG ATAATTCATA
2041CTGGAGAGAA ACCTTACAAA TGTAAAGAAT GTGGCAAAGC TTTTAACCTA TCCTCAACCC
2101TTACTGCACA TAAGAAAATT CATACTGGAG AGAAACCCTA TAAATGTGAA GAATGTGGCA
2161AAGCTTTTAA CCAATCCTCA AACCTTACTA CACATAAGAA AATTCATACT TCAGAGAAAC
2221CCTACAAATG TGAAGAATGT GGCAAATCCT TTAACCAGTT CTCATCTCTT AATATACATA
2281AGATAATTCA TACTGGAGAG AAACCCTACA AATGTGGAGA TTATGGCAGA GCTTTCAACC
2341TATCCTCAAA TCTTACTACA CATAAAGAAA ATTCATACTG GAGAGAAACC CTACAAATGT
2401GAATATGGCA AAACTTACCC AACTTTCTTG TACAAAGTTG Gcattataag aaagcattgc
2461ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)

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