Construct: ORF ccsbBroadEn_10208

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008436.1_s300c1, BRDN0000396659
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IGF2BP2 (10644)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10644 IGF2BP2 insulin like growth factor ... NM_006548.6 99.8% 99.8% 1_3delATG
2 human 10644 IGF2BP2 insulin like growth factor ... NM_001291869.3 98.8% 98.8% 1_3delATG;339_356del
3 human 10644 IGF2BP2 insulin like growth factor ... XM_017005557.2 93.7% 89.7% 1_3delATG;177_178ins61;277_328del
4 human 10644 IGF2BP2 insulin like growth factor ... NM_001007225.3 92.6% 92.6% 1_3delATG;1071_1072ins129
5 human 10644 IGF2BP2 insulin like growth factor ... XM_017005558.2 91.7% 91.7% 1_3delATG;339_356del;1089_1090ins129
6 human 10644 IGF2BP2 insulin like growth factor ... XM_017005559.2 91.5% 91.5% 1_3delATG;339_356del;1479_1480ins132
7 human 10644 IGF2BP2 insulin like growth factor ... NM_001291873.2 88.1% 86.7% (many diffs)
8 human 10644 IGF2BP2 insulin like growth factor ... XM_017005560.2 87.9% 87.9% 0_1ins201;135_152del
9 human 10644 IGF2BP2 insulin like growth factor ... NM_001291872.3 87.2% 85.8% (many diffs)
10 human 10644 IGF2BP2 insulin like growth factor ... NM_001291874.3 80.9% 79.6% (many diffs)
11 human 10644 IGF2BP2 insulin like growth factor ... XM_017005561.1 78.9% 77% (many diffs)
12 human 10644 IGF2BP2 insulin like growth factor ... NM_001291875.3 77.4% 77.4% 0_1ins405
13 human 10644 IGF2BP2 insulin like growth factor ... XM_024453316.1 77.4% 77.4% 0_1ins405
14 human 10644 IGF2BP2 insulin like growth factor ... XM_017005562.1 76.9% 76.1% (many diffs)
15 human 10644 IGF2BP2 insulin like growth factor ... XR_001739984.2 61.2% 1_88del;424_441del;1901_2929del
16 human 10644 IGF2BP2 insulin like growth factor ... XM_017005563.1 60.4% 59.6% (many diffs)
17 human 10644 IGF2BP2 insulin like growth factor ... XM_017005564.1 60.4% 59.6% (many diffs)
18 human 10644 IGF2BP2 insulin like growth factor ... XM_006713477.4 57.3% 57.3% 0_1ins765
19 human 10644 IGF2BP2 insulin like growth factor ... XM_006713478.4 50.1% 50.1% 0_1ins765;303_304ins129
20 human 10644 IGF2BP2 insulin like growth factor ... NR_138486.2 47.1% 1_85del;1153_1154ins129;1751_3400del
21 mouse 319765 Igf2bp2 insulin-like growth factor ... NM_183029.2 89.7% 94.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1860
ORF length:
1794
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA CAAGCTTTAC ATCGGGAACC TGAGCCCCGC CGTCACCGCC GACGACCTCC
121GGCAGCTCTT TGGGGACAGG AAGCTGCCCC TGGCGGGACA GGTCCTGCTG AAGTCCGGCT
181ACGCCTTCGT GGACTACCCC GACCAGAACT GGGCCATCCG CGCCATCGAG ACCCTCTCGG
241GTAAAGTGGA ATTGCATGGG AAAATCATGG AAGTTGATTA CTCAGTCTCT AAAAAGCTAA
301GGAGCAGGAA AATTCAGATT CGAAACATCC CTCCTCACCT GCAGTGGGAG GTGTTGGATG
361GACTTTTGGC TCAATATGGG ACAGTGGAGA ATGTGGAACA AGTCAACACA GACACAGAAA
421CCGCCGTTGT CAACGTCACA TATGCAACAA GAGAAGAAGC AAAAATAGCC ATGGAGAAGC
481TAAGCGGGCA TCAGTTTGAG AACTACTCCT TCAAGATTTC CTACATCCCG GATGAAGAGG
541TGAGCTCCCC TTCGCCCCCT CAGCGAGCCC AGCGTGGGGA CCACTCTTCC CGGGAGCAAG
601GCCACGCCCC TGGGGGCACT TCTCAGGCCA GACAGATTGA TTTCCCGCTG CGGATCCTGG
661TCCCCACCCA GTTTGTTGGT GCCATCATCG GAAAGGAGGG CTTGACCATA AAGAACATCA
721CTAAGCAGAC CCAGTCCCGG GTAGATATCC ATAGAAAAGA GAACTCTGGA GCTGCAGAGA
781AGCCTGTCAC CATCCATGCC ACCCCAGAGG GGACTTCTGA AGCATGCCGC ATGATTCTTG
841AAATCATGCA GAAAGAGGCA GATGAGACCA AACTAGCCGA AGAGATTCCT CTGAAAATCT
901TGGCACACAA TGGCTTGGTT GGAAGACTGA TTGGAAAAGA AGGCAGAAAT TTGAAGAAAA
961TTGAACATGA AACAGGGACC AAGATAACAA TCTCATCTTT GCAGGATTTG AGCATATACA
1021ACCCGGAAAG AACCATCACT GTGAAGGGCA CAGTTGAGGC CTGTGCCAGT GCTGAGATAG
1081AGATTATGAA GAAGCTGCGT GAGGCCTTTG AAAATGATAT GCTGGCTGTT AACCAACAAG
1141CCAATCTGAT CCCAGGGTTG AACCTCAGCG CACTTGGCAT CTTTTCAACA GGACTGTCCG
1201TGCTATCTCC ACCAGCAGGG CCCCGCGGAG CTCCCCCCGC TGCCCCCTAC CACCCCTTCA
1261CTACCCACTC CGGATACTTC TCCAGCCTGT ACCCCCATCA CCAGTTTGGC CCGTTCCCGC
1321ATCATCACTC TTATCCAGAG CAGGAGATTG TGAATCTCTT CATCCCAACC CAGGCTGTGG
1381GCGCCATCAT CGGGAAGAAG GGGGCACACA TCAAACAGCT GGCGAGATTC GCCGGAGCCT
1441CTATCAAGAT TGCCCCTGCG GAAGGCCCAG ACGTCAGCGA AAGGATGGTC ATCATCACCG
1501GGCCACCGGA AGCCCAGTTC AAGGCCCAGG GACGGATCTT TGGGAAACTG AAAGAGGAAA
1561ACTTCTTTAA CCCCAAAGAA GAAGTGAAGC TGGAAGCGCA TATCAGAGTG CCCTCTTCCA
1621CAGCTGGCCG GGTGATTGGC AAAGGTGGCA AGACCGTGAA CGAACTGCAG AACTTAACCA
1681GTGCAGAAGT CATCGTGCCT CGTGACCAAA CGCCAGATGA AAATGAGGAA GTGATCGTCA
1741GAATTATCGG GCACTTCTTT GCTAGCCAGA CTGCACAGCG CAAGATCAGG GAAATTGTAC
1801AACAGGTGAA GCAGCAGGAG CAGAAATACC CTCAGGGAGT CGCCTCACAG CGCAGCAAGT
1861GCCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1921acgaac

Download FASTA (ORF) (Full)