Construct: ORF ccsbBroad304_13028

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010702.1_s304c1, BRDN0000410347
Derived from:
ccsbBroadEn_13028
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF257 (113835)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13028
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 113835 ZNF257 zinc finger protein 257 NM_001316996.2 99.8% 99.8% 706C>A;967C>G
2 human 113835 ZNF257 zinc finger protein 257 NM_033468.4 94.1% 94.1% 1_96del;802C>A;1063C>G
3 human 113835 ZNF257 zinc finger protein 257 NM_001316997.2 91.5% 91.5% 0_1ins132;574C>A;835C>G
4 human 113835 ZNF257 zinc finger protein 257 NM_001316998.2 91.5% 91.5% 0_1ins132;574C>A;835C>G
5 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 78% 68.1% (many diffs)
6 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 77.2% 67.4% (many diffs)
7 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 75.6% 64.8% (many diffs)
8 human 7562 ZNF708 zinc finger protein 708 XM_017027204.2 74.1% 64.7% (many diffs)
9 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 72.7% 64.2% (many diffs)
10 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 72% 63.6% (many diffs)
11 human 440519 ZNF724 zinc finger protein 724 NM_001355405.2 70.6% 61.8% (many diffs)
12 human 440519 ZNF724 zinc finger protein 724 XM_024451520.1 70.6% 61.8% (many diffs)
13 human 353088 ZNF429 zinc finger protein 429 NM_001346913.2 69.8% 61.4% (many diffs)
14 human 353088 ZNF429 zinc finger protein 429 NM_001346914.2 69.8% 61.4% (many diffs)
15 human 353088 ZNF429 zinc finger protein 429 NM_001346915.2 69.8% 61.4% (many diffs)
16 human 353088 ZNF429 zinc finger protein 429 XM_017026750.2 69.8% 61.4% (many diffs)
17 human 353088 ZNF429 zinc finger protein 429 XM_017026752.1 69.8% 61.4% (many diffs)
18 human 353088 ZNF429 zinc finger protein 429 XM_017026753.2 69.8% 61.4% (many diffs)
19 human 353088 ZNF429 zinc finger protein 429 XM_017026755.1 69.8% 61.4% (many diffs)
20 human 353088 ZNF429 zinc finger protein 429 NM_001346912.2 66.7% 58.7% (many diffs)
21 human 353088 ZNF429 zinc finger protein 429 NM_001001415.4 66.5% 58.5% (many diffs)
22 human 353088 ZNF429 zinc finger protein 429 NM_001346916.2 65.3% 56.9% (many diffs)
23 human 353088 ZNF429 zinc finger protein 429 XM_017026748.2 65% 57.2% (many diffs)
24 human 353088 ZNF429 zinc finger protein 429 XM_017026749.1 65% 57.2% (many diffs)
25 human 284443 ZNF493 zinc finger protein 493 NM_001076678.3 58.2% 49.4% (many diffs)
26 human 148203 ZNF738 zinc finger protein 738 NM_001355237.2 44.9% 38% (many diffs)
27 human 284443 ZNF493 zinc finger protein 493 NM_145326.3 8.1% 6.4% (many diffs)
28 human 7639 ZNF85 zinc finger protein 85 NM_001256172.2 8.1% 6.9% (many diffs)
29 human 148203 ZNF738 zinc finger protein 738 NM_001355240.1 8.1% 6.7% (many diffs)
30 human 9534 ZNF254 zinc finger protein 254 NM_001278665.2 7.8% 6.8% (many diffs)
31 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 7.6% 7.2% (many diffs)
32 human 51427 ZNF107 zinc finger protein 107 XM_024446791.1 7.2% 6.7% (many diffs)
33 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 7.1% 6.2% (many diffs)
34 human 148203 ZNF738 zinc finger protein 738 NM_001355241.2 6.8% 6.2% (many diffs)
35 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 5% 2.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1659
ORF length:
1593
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtt agagaactac agaaacctgg tcttcctggg tattgctgtc tctaagccag
121acctgatcac ctgtctggag caaggaaaag agccctgtaa tatgaagaga catgagatgg
181tagccaaacc cccagttatg tgttctcata ttgctgaaga cctttgccca gagcgagaca
241taaaatattt tttccaaaaa gtcatactga ggagatatga taaatgtgaa catgagaatt
301tacaattaag aaagggctgt aaaagtgtgg atgagtgtaa ggtgtgcaaa ggaggttata
361atggacttaa ccaatgtctg ataactaccc agagcaaaat gtatcaatgt gataaatatg
421taaaagtctt ctataagttt tcaaattcag atagacataa gataagacat actgaaaaga
481aaacttgcaa atgtaaagaa tgtggcaaat cattttgcat gctttcacaa ctaactcgac
541ataagagaat tcatattaga gagaattccc acaaatgtga agaatgtggc aaagccttta
601accagtcctc agctcttact cgacataaga tgactcatac tggagagaaa ccctacaaat
661gtgaagagtg tggaaaagct tttaaccggt cttcacacct tactcaacat aaggtaattc
721atactagaga gaaaccctac aaatgtgaag agtgtggcaa agcctttaac aggtcttcac
781acattactca acataagaga attcataata gagagaagcc cttcaaatat gatgaatgtt
841gcaaagcctt taagtggtcc tcagctctta ctacccttac tcaacataag agaattcata
901ctggagagaa accctacaaa tgtgaagagt gtggcaaagc ctttaaccag tcctcagccc
961ttactcgaca taagatgatt catactggag agaaaccctt ccaatgtgaa gagtgtggca
1021aagcttttaa cgggtcttca caccttactc aacataagat aattcatact aaagagaaac
1081cctacaaatg tgaagagtgt ggaaaagcct ttaaccggtc ttcacacctt actaaacata
1141agagaattca tactagagag aaggcctaca aatgtgatga atattgcaaa gcttttaact
1201ggtcctcagc tcttactacc cttactcagc ataagataat tcatactgga gagaaaccct
1261acaaatgtga agagtgtggc aaagccttta accggtcttc ataccttatt cgacataaga
1321taattcatac tggagagaaa ccctacaaat gtgaagagtg tggcaaagcc tttaaccagt
1381cttcacacct tactcaacat aaaataattc atactgggga gaagccctac aaatgtgaag
1441aatgtggcaa agcctttaac cggtcttcac acctttctca acataagata attcatactg
1501gagagaaacc ctacaaatgt gaagaatgtg gcaagccttt taatcgtttc tcatacctta
1561ccgtacataa gagaattcat gctggagaga accccaacaa atatgaagaa tgtggcaaag
1621cttgtaacca ttcctcaaac cttactaaac ataattcata cccaactttc ttgtacaaag
1681tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
1741gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)