Construct: ORF ccsbBroadEn_06871

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013971.1_s300c1, BRDN0000393668
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNH1 (6050)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6050 RNH1 ribonuclease/angiogenin inh... NM_002939.4 99.7% 99.7% 563G>A;570G>A;1239C>G
2 human 6050 RNH1 ribonuclease/angiogenin inh... NM_203383.2 99.7% 99.7% 563G>A;570G>A;1239C>G
3 human 6050 RNH1 ribonuclease/angiogenin inh... NM_203384.2 99.7% 99.7% 563G>A;570G>A;1239C>G
4 human 6050 RNH1 ribonuclease/angiogenin inh... NM_203385.1 99.7% 99.7% 563G>A;570G>A;1239C>G
5 human 6050 RNH1 ribonuclease/angiogenin inh... NM_203386.3 99.7% 99.7% 563G>A;570G>A;1239C>G
6 human 6050 RNH1 ribonuclease/angiogenin inh... NM_203387.3 99.7% 99.7% 563G>A;570G>A;1239C>G
7 human 6050 RNH1 ribonuclease/angiogenin inh... NM_203388.3 99.7% 99.7% 563G>A;570G>A;1239C>G
8 human 6050 RNH1 ribonuclease/angiogenin inh... NM_203389.3 99.7% 99.7% 563G>A;570G>A;1239C>G
9 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520255.1 99.7% 99.7% 563G>A;570G>A;1239C>G
10 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520257.3 99.7% 99.7% 563G>A;570G>A;1239C>G
11 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520258.3 99.7% 99.7% 563G>A;570G>A;1239C>G
12 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520259.3 99.7% 99.7% 563G>A;570G>A;1239C>G
13 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520260.2 99.7% 99.7% 563G>A;570G>A;1239C>G
14 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520261.2 99.7% 99.7% 563G>A;570G>A;1239C>G
15 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520262.3 99.7% 99.7% 563G>A;570G>A;1239C>G
16 human 6050 RNH1 ribonuclease/angiogenin inh... XM_011520263.1 99.7% 99.7% 563G>A;570G>A;1239C>G
17 human 6050 RNH1 ribonuclease/angiogenin inh... XM_017018106.1 99.7% 99.7% 563G>A;570G>A;1239C>G
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1449
ORF length:
1383
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG CCTGGACATC CAGAGCCTGG ACATCCAGTG TGAGGAGCTG AGCGACGCTA
121GATGGGCCGA GCTCCTCCCT CTGCTCCAGC AGTGCCAAGT GGTCAGGCTG GACGACTGTG
181GCCTCACGGA AGCACGGTGC AAGGACATCA GCTCTGCACT TCGAGTCAAC CCTGCACTGG
241CAGAGCTCAA CCTGCGCAGC AACGAGCTGG GCGATGTCGG CGTGCATTGC GTGCTCCAGG
301GCCTGCAGAC CCCCTCCTGC AAGATCCAGA AGCTGAGCCT CCAGAACTGC TGCCTGACGG
361GGGCCGGCTG CGGGGTCCTG TCCAGCACAC TACGCACCCT GCCCACCCTG CAGGAGCTGC
421ACCTCAGCGA CAACCTCTTG GGGGATGCGG GCCTGCAGCT GCTCTGCGAA GGACTCCTGG
481ACCCCCAGTG CCGCCTGGAA AAGCTGCAGC TGGAGTATTG CAGCCTCTCG GCTGCCAGCT
541GCGAGCCCCT GGCCTCCGTG CTCAGGGCCA AGCCGGACTT CAAGGAGCTC ACGGTTAGCA
601ACAACGACAT CAATGAGGCT GGCGTCCATG TGCTATGCCA GGGCCTGAAG GACTCCCCCT
661GCCAGCTGGA GGCGCTCAAG CTGGAGAGCT GCGGTGTGAC ATCAGACAAC TGCCGGGACC
721TGTGCGGCAT TGTGGCCTCC AAGGCCTCGC TGCGGGAGCT GGCCCTGGGC AGCAACAAGC
781TGGGTGATGT GGGCATGGCG GAGCTGTGCC CAGGGCTGCT CCACCCCAGC TCCAGGCTCA
841GGACCCTGTG GATCTGGGAG TGTGGCATCA CTGCCAAGGG CTGCGGGGAT CTGTGCCGTG
901TCCTCAGGGC CAAGGAGAGC CTGAAGGAGC TCAGCCTGGC CGGCAACGAG CTGGGGGATG
961AGGGTGCCCG ACTGCTGTGT GAGACCCTGC TGGAACCTGG CTGCCAGCTG GAGTCGCTGT
1021GGGTGAAGTC CTGCAGCTTC ACAGCCGCCT GCTGCTCCCA CTTCAGCTCA GTGCTGGCCC
1081AGAACAGGTT TCTCCTGGAG CTACAGATAA GCAACAACAG GCTGGAGGAT GCGGGCGTGC
1141GGGAGCTGTG CCAGGGCCTG GGCCAGCCTG GCTCTGTGCT GCGGGTGCTC TGGTTGGCCG
1201ACTGCGATGT GAGTGACAGC AGCTGCAGCA GCCTCGCCGC AACCCTGTTG GCCAACCACA
1261GCCTGCGTGA GCTGGACCTC AGCAACAACT GCCTGGGGGA CGCGGGCATC CTGCAGCTGG
1321TGGAGAGCGT CCGGCAGCCG GGCTGCCTCC TGGAGCAGCT GGTCCTGTAC GACATTTACT
1381GGTCTGAGGA GATGGAGGAC CGGCTGCAGG CCCTGGAGAA GGACAAGCCA TCCCTGAGGG
1441TCATCTCCTG CCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
1501tttgttgcaa cgaac

Download FASTA (ORF) (Full)