Construct: ORF TRCN0000469534

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015827.1_s317c1
Derived from:
ccsbBroadEn_06489
DNA Barcode:
TAGGTTCAGTACAATACTGACCCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KIR3DL1 (3811)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469534
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3811 KIR3DL1 killer cell immunoglobulin ... NM_013289.2 99.6% 99.3% (many diffs)
2 human 3811 KIR3DL1 killer cell immunoglobulin ... NM_001322168.1 99.3% 98.6% (many diffs)
3 human 3812 KIR3DL2 killer cell immunoglobulin ... NM_006737.4 90.7% 83.5% (many diffs)
4 human 3812 KIR3DL2 killer cell immunoglobulin ... NM_001242867.2 87.1% 79.7% (many diffs)
5 human 3813 KIR3DS1 killer cell immunoglobulin ... NM_001083539.2 84.8% 79.7% (many diffs)
6 human 112268355 LOC112268355 killer cell immunoglobulin-... NM_001368254.1 84.8% 79.7% (many diffs)
7 human 3812 KIR3DL2 killer cell immunoglobulin ... XM_011526940.3 83.7% 76.9% (many diffs)
8 human 115653 KIR3DL3 killer cell immunoglobulin ... NM_153443.4 80.3% 70% (many diffs)
9 human 3803 KIR2DL2 killer cell immunoglobulin ... NM_014219.2 72.7% 67.3% (many diffs)
10 human 3802 KIR2DL1 killer cell immunoglobulin ... NM_014218.3 72.1% 66.2% (many diffs)
11 human 112267881 LOC112267881 killer cell immunoglobulin-... NM_001368251.1 71.9% 66.2% (many diffs)
12 human 3804 KIR2DL3 killer cell immunoglobulin ... NM_015868.3 71.1% 65% (many diffs)
13 human 3812 KIR3DL2 killer cell immunoglobulin ... XM_017026784.2 70.9% 64.7% (many diffs)
14 human 3811 KIR3DL1 killer cell immunoglobulin ... XM_017030274.1 69.2% 51.6% (many diffs)
15 human 100132285 KIR2DS2 killer cell immunoglobulin ... NM_001291695.1 66.1% 60.4% (many diffs)
16 human 3813 KIR3DS1 killer cell immunoglobulin ... NM_001282170.1 63.4% 58.6% (many diffs)
17 human 57292 KIR2DL5A killer cell immunoglobulin ... NM_020535.3 63.3% 55.2% (many diffs)
18 human 100132285 KIR2DS2 killer cell immunoglobulin ... NM_012312.4 63% 57.6% (many diffs)
19 human 100132285 KIR2DS2 killer cell immunoglobulin ... XM_017030275.2 63% 57.6% (many diffs)
20 human 553128 KIR2DL5B killer cell immunoglobulin ... NM_001018081.1 62.8% 54.1% (many diffs)
21 human 3805 KIR2DL4 killer cell immunoglobulin ... NM_002255.6 62.1% 52.5% (many diffs)
22 human 112268354 LOC112268354 killer cell immunoglobulin-... NM_001368253.1 62.1% 52.2% (many diffs)
23 human 3806 KIR2DS1 killer cell immunoglobulin ... NM_014512.1 62% 56% (many diffs)
24 human 3806 KIR2DS1 killer cell immunoglobulin ... XM_011547998.2 62% 56% (many diffs)
25 human 3809 KIR2DS4 killer cell immunoglobulin ... NM_012314.6 61.8% 56% (many diffs)
26 human 3810 KIR2DS5 killer cell immunoglobulin ... NM_014513.2 61.7% 55.6% (many diffs)
27 human 102725023 LOC102725023 killer cell immunoglobulin-... NM_001360171.1 61.4% 54.5% (many diffs)
28 human 3808 KIR2DS3 killer cell immunoglobulin ... NM_012313.1 61.3% 54.2% (many diffs)
29 human 3802 KIR2DL1 killer cell immunoglobulin ... XM_017026782.1 61.1% 56.7% (many diffs)
30 human 100132285 KIR2DS2 killer cell immunoglobulin ... NM_001291701.1 59.5% 54.2% (many diffs)
31 human 3813 KIR3DS1 killer cell immunoglobulin ... NM_001282171.1 58.8% 53.8% (many diffs)
32 human 3805 KIR2DL4 killer cell immunoglobulin ... NM_001080770.2 56% 47.5% (many diffs)
33 human 3806 KIR2DS1 killer cell immunoglobulin ... XM_024452542.1 53.7% 45.7% (many diffs)
34 human 3805 KIR2DL4 killer cell immunoglobulin ... NM_001080772.2 52.3% 44.1% (many diffs)
35 human 3802 KIR2DL1 killer cell immunoglobulin ... XM_017026783.1 51.2% 44.1% (many diffs)
36 human 3806 KIR2DS1 killer cell immunoglobulin ... XM_024452543.1 50.9% 46.6% (many diffs)
37 human 3806 KIR2DS1 killer cell immunoglobulin ... XM_024452544.1 50.9% 46.6% (many diffs)
38 human 3806 KIR2DS1 killer cell immunoglobulin ... XM_024452545.1 50.9% 46.6% (many diffs)
39 human 3809 KIR2DS4 killer cell immunoglobulin ... NM_001281971.2 48.2% 29.8% (many diffs)
40 human 3806 KIR2DS1 killer cell immunoglobulin ... XM_017030286.1 46.9% 41.4% (many diffs)
41 human 3802 KIR2DL1 killer cell immunoglobulin ... XM_011526939.2 46.8% 40.9% (many diffs)
42 human 3809 KIR2DS4 killer cell immunoglobulin ... NM_001281972.2 44.7% 30.5% (many diffs)
43 human 100132285 KIR2DS2 killer cell immunoglobulin ... NM_001291696.1 41.1% 36.4% (many diffs)
44 human 107987438 LOC107987438 uncharacterized LOC107987438 XR_001756645.1 21.5% (many diffs)
45 human 100132285 KIR2DS2 killer cell immunoglobulin ... NM_001291700.1 20.7% 15.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1398
ORF length:
1332
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc gctcatggtc gtcagcatgg cgtgtgttgg gttgttcttg gtccagaggg
121ccggtccaca catgggtggt caggacaagc ccttcctgtc tgcctggccc agcgctgtgg
181tgcctcgcgg aggacacgtg actcttcggt gtcactatcg tcataggttt aacaatttca
241tgctatacaa agaagacaga atccacgttc ccatcttcca tggcagaata ttccaggagg
301gcttcaacat gagccctgtg accacagcac atgcagggaa ctacacatgt cggggttcac
361acccacactc ccccactggg tggtcggcac ccagcaaccc catggtgatc atggtcacag
421gaaaccacag aaaaccttcc ctcctggccc acccaggtcc cctggtgaaa tcaggagaga
481gagtcatcct gcaatgttgg tcagatatca tgtttgagca cttctttctg cacaaagagg
541ggatctctaa ggacccctca cgcctcgttg gacagatcca tgatggggtc tccaaggcca
601atttctccat cggtcccatg atgcttgccc ttgcagggac ctacagatgc tacggttctg
661ttactcacac cccctatcag ttgtcagctc ccagtgatcc cctggacatc gtggtcacag
721gtccatatga gaaaccttct ctctcagccc agccgggccc caaggttcag gcaggagaga
781gcgtgacctt gtcctgtagc tcccggagct cctatgacat gtaccatcta tccagggagg
841ggggagccca tgaacgtagg ctccctgcag tgcgcaaggt caacagaaca ttccaggcag
901atttccctct gggccctgcc acccacggag ggacctacag atgcttcggc tctttccgtc
961actctcccTA CGAGTGGTCA GACCCGAGTG ACCCACTGCT TGTTTCTGTC ACAGGAAACC
1021CTTCAAGTAG TTGGCCTTCA CCCACAGAAC CAAGCTCCAA ATCTGGTAAC CCCAGACACC
1081TGCACATTCT GATTGGGACC TCAGTGGTCA TCATCCTCTT CATCCTCCTC CTCTTCTTTC
1141TCCTTCATCT CTGGTGCTCC AACAAAAAAA ATGCTGCTGT AATGGACCAA GAGCCTGCAG
1201GGAACAGAAC AGCCAACAGC GAGGACTCTG ATGAACAAGA CCCTGAGGAG GTGACATACG
1261CACAGTTGGA TCACTGCGTT TTCACACAGA GAAAAATCAC TCGCCCTTCT CAGAGGCCCA
1321AGACACCCCC TACAGATACC ATCTTGTACA CGGAACTTCC AAATGCTAAG CCCAGATCCA
1381AAGTTGTCTC CTGCCCATGC CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1441TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1501GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGATAGGTTC AGTACAATAC
1561TGACCCAACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)