Construct: ORF TRCN0000468487

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004927.1_s317c1
Derived from:
ccsbBroadEn_09655
DNA Barcode:
GAACACCAGATCGGTGGCCCTCAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF98 (148198)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468487
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57615 ZNF492 zinc finger protein 492 NM_020855.3 99% 97.7% (many diffs)
2 human 148198 ZNF98 zinc finger protein 98 NM_001098626.2 92.6% 92.6% (many diffs)
3 human 100129842 ZNF737 zinc finger protein 737 XM_017026116.1 79.2% 70.4% (many diffs)
4 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 75.8% 64.3% (many diffs)
5 human 100129842 ZNF737 zinc finger protein 737 NM_001159293.2 74.8% 66.4% (many diffs)
6 human 646864 ZNF723 zinc finger protein 723 NM_001349726.2 73.7% 64.4% (many diffs)
7 human 646864 ZNF723 zinc finger protein 723 XM_024451652.1 73.7% 64.4% (many diffs)
8 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 73.5% 63.9% (many diffs)
9 human 80264 ZNF430 zinc finger protein 430 NM_001172671.2 73.3% 62.9% (many diffs)
10 human 80264 ZNF430 zinc finger protein 430 NM_025189.4 73.1% 62.8% (many diffs)
11 human 100129543 ZNF730 zinc finger protein 730 NM_001277403.2 72.8% 63.7% (many diffs)
12 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 72.8% 63.3% (many diffs)
13 human 9534 ZNF254 zinc finger protein 254 NM_001278661.1 71.8% 64% (many diffs)
14 human 9534 ZNF254 zinc finger protein 254 NM_001278662.2 71.8% 64% (many diffs)
15 human 9534 ZNF254 zinc finger protein 254 NM_001278677.2 71.8% 64% (many diffs)
16 human 9534 ZNF254 zinc finger protein 254 XM_011528443.1 71.8% 64% (many diffs)
17 human 9534 ZNF254 zinc finger protein 254 XM_011528444.2 71.8% 64% (many diffs)
18 human 9534 ZNF254 zinc finger protein 254 XM_017027515.1 71.8% 64% (many diffs)
19 human 100129543 ZNF730 zinc finger protein 730 XM_017026115.2 71.7% 62.7% (many diffs)
20 human 440519 ZNF724 zinc finger protein 724 NM_001355405.2 71.6% 61.6% (many diffs)
21 human 440519 ZNF724 zinc finger protein 724 XM_024451520.1 71.6% 61.6% (many diffs)
22 human 100129543 ZNF730 zinc finger protein 730 XM_017026114.1 71.4% 62.5% (many diffs)
23 human 163227 ZNF100 zinc finger protein 100 NM_001351671.2 71% 59.2% (many diffs)
24 human 148213 ZNF681 zinc finger protein 681 NM_138286.3 70.2% 60.6% (many diffs)
25 human 163227 ZNF100 zinc finger protein 100 NM_001351669.2 69.2% 58.5% (many diffs)
26 human 163227 ZNF100 zinc finger protein 100 NM_173531.4 69.1% 58.4% (many diffs)
27 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 56.4% 48.6% (many diffs)
28 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 56.4% 48.6% (many diffs)
29 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 56.4% 48.6% (many diffs)
30 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 56.4% 48.6% (many diffs)
31 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 56.4% 48.6% (many diffs)
32 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 56.4% 48.6% (many diffs)
33 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 56.4% 48.6% (many diffs)
34 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 56.4% 48.6% (many diffs)
35 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 56.4% 48.6% (many diffs)
36 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 56.4% 48.6% (many diffs)
37 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 56.4% 48.6% (many diffs)
38 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 56.4% 48.6% (many diffs)
39 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 56.4% 48.6% (many diffs)
40 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 56.4% 48.6% (many diffs)
41 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 56.4% 48.6% (many diffs)
42 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 55.9% 48.3% (many diffs)
43 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 55.3% 47.7% (many diffs)
44 human 163227 ZNF100 zinc finger protein 100 NM_001351672.2 53% 45.1% (many diffs)
45 human 148203 ZNF738 zinc finger protein 738 NM_001355237.2 44.8% 37% (many diffs)
46 human 9534 ZNF254 zinc finger protein 254 NM_001278665.2 7.6% 6.8% (many diffs)
47 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 7.2% 6.5% (many diffs)
48 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 6.9% 6% (many diffs)
49 human 148203 ZNF738 zinc finger protein 738 NM_001355241.2 6.5% 5.7% (many diffs)
50 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 4.9% 2.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1662
ORF length:
1593
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gttagagaac tacagaaacc tggtcttcgt gggtattgct gcctctaagc
121cagacctgat cacctgtctg gagcaaggaa aagaaccttg gaatgtgaag agacatgaga
181tggtaactga acccccagtt gtatattctt attttgccca agacctttgg ccaaagcagg
241gcaaaaaaaa ttatttccaa aaagtgatac tgagaacata taaaaaatgt ggacgtgaaa
301atttacagtt aagaaaatac tgtaaaagca tggatgagtg taaggtgcac aaagaatgtt
361acaatggact taaccagtgt ttgacaacta cccagaacaa aatatttcaa tatgacaaat
421atgtgaaagt ctttcataaa ttttcaaatt caaacagaca taagatagga catactggaa
481agaaatcttt caaatgtaaa gaatgtgaaa agtcattttg catgctttca cacttagctc
541aacataaaag aattcatagt ggagagaaac cctacaaatg taaagaatgt gggaaagcct
601ataatgaggc ctcaaacctt tctacacata aaagaattca tactggaaag aaaccctaca
661aatgcgaaga gtgtggaaaa gcctttaacc ggctctcaca ccttactaca cataagataa
721ttcatactgg aaagaaaccc tacaaatgtg aggagtgtgg caaagctttt aaccaatctg
781caaaccttac tacacataag agaattcata ctggagagaa accctacaaa tgtgaagaat
841gtggcagagc ttttagccag tcctcaaccc ttactgcaca taagataatt catgctggag
901agaaacctta caaatgtgaa gaatgtggca aagcttttag ccagtcctca acccttacta
961cacataagat aattcatact ggagagaaat tctacaaatg tgaagaatgt ggtaaggcct
1021ttagccggtt atcccacctt actacacata agagaattca ttctggagag aaaccctaca
1081agtgtgaaga atgtggcaaa gcttttaaac aatcctcaac ccttactaca cataagagaa
1141ttcatgctgg agagaaattc tacgaatgtg aagtatgtag caaagccttt agccggttct
1201cacaccttac tacacataag agaattcata ctggagagaa gccctacaaa tgtgaagaat
1261gtggcaaagc ttttaaccta tcatcacaac ttactacaca taagataatt catactggag
1321agaaacccta caaatgtgaa gaatgtgGCA AAGCTTTTAA CCAGTCCTCA ACTCTTTCTA
1381AACATAAGGT AATTCATACT GGAGAGAAGC CCTACAAATG TGAAGAATGT GGCAAAGCTT
1441TTAACCAGTC CTCACACCTT ACTACACATA AGATGATTCA TACTGGAGAG AAACCCTACA
1501AGTGTGAAGA ATGCGGCAAA GCCTTTAACA ACTCCTCTAT TCTTAACAGA CATAAGATGA
1561TTCATACTGG AGAGAAACTC TACAAACCTG AAAGTTGTAA CAATGCTTGT GACAACATTG
1621CAAAGATTTC CAAATATAAA AGAAATTGTG CTGGTGAGAA ATTGCCAACT TTCTTGTACA
1681AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1741AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1801AGGACGAGAA CACCAGATCG GTGGCCCTCA AACGCGTTAA GTCgacaatc aacctctgga
1861ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)