Construct: ORF ccsbBroad304_09302

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000526.1_s304c1, BRDN0000412150
Derived from:
ccsbBroadEn_09302
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF486 (90649)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09302
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 90649 ZNF486 zinc finger protein 486 NM_052852.4 99.9% 99.7% 413G>A
2 human 440515 ZNF506 zinc finger protein 506 NM_001099269.3 79.5% 69.4% (many diffs)
3 human 56242 ZNF253 zinc finger protein 253 NM_021047.3 77% 65.4% (many diffs)
4 human 440515 ZNF506 zinc finger protein 506 NM_001145404.2 73.4% 63.4% (many diffs)
5 human 199777 ZNF626 zinc finger protein 626 NM_001076675.3 73.1% 62.3% (many diffs)
6 human 100129842 ZNF737 zinc finger protein 737 NM_001159293.2 72.4% 63.3% (many diffs)
7 human 100129842 ZNF737 zinc finger protein 737 XM_006722597.4 70.6% 61.7% (many diffs)
8 human 100129842 ZNF737 zinc finger protein 737 XM_011527599.3 70.6% 61.7% (many diffs)
9 human 100129842 ZNF737 zinc finger protein 737 XM_005259697.4 70.5% 61.6% (many diffs)
10 human 100129842 ZNF737 zinc finger protein 737 XM_011527598.3 70.5% 61.6% (many diffs)
11 human 10793 ZNF273 zinc finger protein 273 NM_021148.2 68.9% 57.6% (many diffs)
12 human 7617 ZNF66 zinc finger protein 66 NM_001355197.2 67.6% 58.4% (many diffs)
13 human 100129842 ZNF737 zinc finger protein 737 XM_017026116.1 67.1% 58.3% (many diffs)
14 human 7643 ZNF90 zinc finger protein 90 NM_007138.2 66.1% 56.2% (many diffs)
15 human 171392 ZNF675 zinc finger protein 675 NM_138330.3 65.9% 56% (many diffs)
16 human 10793 ZNF273 zinc finger protein 273 XM_024446635.1 65.4% 54.6% (many diffs)
17 human 10793 ZNF273 zinc finger protein 273 XM_024446636.1 65.4% 54.6% (many diffs)
18 human 10793 ZNF273 zinc finger protein 273 XM_024446637.1 65.4% 54.6% (many diffs)
19 human 10793 ZNF273 zinc finger protein 273 XM_024446638.1 65.4% 54.6% (many diffs)
20 human 10793 ZNF273 zinc finger protein 273 XM_024446639.1 65.4% 54.6% (many diffs)
21 human 10793 ZNF273 zinc finger protein 273 XM_024446640.1 65.4% 54.6% (many diffs)
22 human 10793 ZNF273 zinc finger protein 273 XM_024446641.1 65.4% 54.6% (many diffs)
23 human 56242 ZNF253 zinc finger protein 253 NM_001331133.1 65.4% 54.4% (many diffs)
24 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 64.7% 55.6% (many diffs)
25 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 64.4% 54.8% (many diffs)
26 human 56242 ZNF253 zinc finger protein 253 NM_001331134.1 63.2% 52.2% (many diffs)
27 human 81931 ZNF93 zinc finger protein 93 NM_031218.4 62% 52.9% (many diffs)
28 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 61.4% 52% (many diffs)
29 human 100129842 ZNF737 zinc finger protein 737 XM_017026117.2 60.1% 51.6% (many diffs)
30 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 60% 51% (many diffs)
31 human 100129842 ZNF737 zinc finger protein 737 XR_001753570.2 56.2% (many diffs)
32 human 7608 ZNF56 zinc finger protein 56 NM_001355194.2 38% 26.6% (many diffs)
33 human 664701 ZNF826P zinc finger protein 826, ps... NR_036455.1 35.3% (many diffs)
34 human 105372319 LOC105372319 zinc finger protein 430-like XM_017027571.1 34.2% 22.4% (many diffs)
35 human 7643 ZNF90 zinc finger protein 90 XR_001753753.2 28.8% (many diffs)
36 human 10793 ZNF273 zinc finger protein 273 NR_003099.1 26.9% (many diffs)
37 human 199777 ZNF626 zinc finger protein 626 NM_145297.3 17.8% 15% (many diffs)
38 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 14.6% 12.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1458
ORF length:
1389
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gccgggaccc cttagaagcc tagaaatgga atcattgcaa tttagagatg
121tggctgtaga attctctctg gaggagtggc attgcctgga cactgcacag cagaatttat
181atagggatgt gatgttagag aactacagac acctggtctt ccttggtatt attgtctcta
241agccagacct gatcacctgt ctggagcaag gaataaaacc tctgactatg aagagacatg
301agatgattgc caaaccccca gttgtgtgtt ctcattttgc ccaagacctt tggccagagc
361agagcataaa agattcttac caaaaagtga tactgagaaa atttgaaaaa tgtggacatg
421gcaatttaca ctttaaaaaa ggctgtgaaa gtgtggatga gtgtaagtta cacaaaagag
481attataatgg acttaaccaa tgtttgacaa ctacccagag caaaatattt caatgtggta
541aatatgtgaa agtctttcat caattttcaa attcaaagag acataaaaga agacatactg
601aaaaaaaacc tttgaaatat atagaaggtg acaaagcttt taaccagtcc tcaacccata
661ctacacataa aaaaattgat actggagaga aaccatacaa atgtgaagaa tgtggcaaag
721ccttcaaccg gtcctcacac cttactacac ataagataac tcatactaga gagaaaccct
781acaaatgtga agaatgtggc aaagtcttta agtacttctc tagctttact acacataaga
841aaattcatag tggagagaaa ccctacattt gtgaagaatg tggcaaagcc tttatgtacc
901cctataccct tactacacat aagataatcc atactggaga gcaaccctac aaatgtaaag
961aatgtgacaa agcttttaac catcctgcaa ctctttcttc acataagaaa attcatactg
1021gagagaaacc gtacacgtgt gataaatgtg gcaaagcctt tatttcatcc tcgatcctta
1081gtaaacatga gaagattcat acgggagaga aaccctacaa atgtgaagaa tgtggcaaag
1141ccttcacccg ctcctcacac cttactatgc ataagataat tcatactgga gagaaaccat
1201acaaatgtga agaatgtggc aaagccttta catggtctgc aggcctccat aaacatagga
1261gaactcatac tggagagaaa ccctacaaat gtgaagaatg tggcaaagcg tatactacat
1321cctcaaatct aactgaacat aagacaactc atactggaga gaaaccttac aaatgtaaag
1381aatgtggcaa agcttttaac tggtcctcag accttaataa acataagaga attcatattg
1441gacagaaacc aagaacgttg ccaactttct tgtacaaagt ggttggtaag cctatcccta
1501accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1561agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.