Construct: ORF TRCN0000472815

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001984.1_s317c1
Derived from:
ccsbBroadEn_09774
DNA Barcode:
CCTGACTCCCTTTAAGTGTTCGTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF92 (168374)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472815
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 168374 ZNF92 zinc finger protein 92 NM_007139.4 99.9% 99.8% 1268A>G
2 human 168374 ZNF92 zinc finger protein 92 NM_001287533.2 98.5% 98.4% 0_1ins21;1247A>G
3 human 168374 ZNF92 zinc finger protein 92 NM_001287534.2 98.5% 98.4% 0_1ins21;1247A>G
4 human 168374 ZNF92 zinc finger protein 92 NM_001287532.1 93% 92.2% (many diffs)
5 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 88.1% 88% 1_207del;1475A>G
6 human 7562 ZNF708 zinc finger protein 708 NM_001297560.1 80.5% 69.2% (many diffs)
7 human 7562 ZNF708 zinc finger protein 708 NM_001297561.1 80.5% 69.2% (many diffs)
8 human 7562 ZNF708 zinc finger protein 708 XM_017027202.2 80.2% 69.3% (many diffs)
9 human 7562 ZNF708 zinc finger protein 708 XM_017027203.2 80.2% 69.3% (many diffs)
10 human 170959 ZNF431 zinc finger protein 431 NM_001319127.2 77.7% 66.7% (many diffs)
11 human 170959 ZNF431 zinc finger protein 431 NM_001319126.2 77.4% 65.5% (many diffs)
12 human 340252 ZNF680 zinc finger protein 680 XM_024446742.1 74.5% 63.4% (many diffs)
13 human 163227 ZNF100 zinc finger protein 100 NM_001351671.2 73% 61.7% (many diffs)
14 human 7562 ZNF708 zinc finger protein 708 XM_017027204.2 72.7% 61.9% (many diffs)
15 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 72.5% 62.3% (many diffs)
16 human 10793 ZNF273 zinc finger protein 273 XM_024446635.1 72% 61.9% (many diffs)
17 human 10793 ZNF273 zinc finger protein 273 XM_024446636.1 72% 61.9% (many diffs)
18 human 10793 ZNF273 zinc finger protein 273 XM_024446637.1 72% 61.9% (many diffs)
19 human 10793 ZNF273 zinc finger protein 273 XM_024446638.1 72% 61.9% (many diffs)
20 human 10793 ZNF273 zinc finger protein 273 XM_024446639.1 72% 61.9% (many diffs)
21 human 10793 ZNF273 zinc finger protein 273 XM_024446640.1 72% 61.9% (many diffs)
22 human 10793 ZNF273 zinc finger protein 273 XM_024446641.1 72% 61.9% (many diffs)
23 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 71.8% 61.7% (many diffs)
24 human 340252 ZNF680 zinc finger protein 680 XM_006715959.2 69.5% 59.2% (many diffs)
25 human 170959 ZNF431 zinc finger protein 431 NM_133473.4 66% 56.6% (many diffs)
26 human 170959 ZNF431 zinc finger protein 431 NM_001319124.2 65.9% 56.5% (many diffs)
27 human 80264 ZNF430 zinc finger protein 430 NM_001172671.2 65.2% 54.4% (many diffs)
28 human 80264 ZNF430 zinc finger protein 430 NM_025189.4 65.1% 54.3% (many diffs)
29 human 340252 ZNF680 zinc finger protein 680 NM_178558.5 64.8% 55.1% (many diffs)
30 human 646864 ZNF723 zinc finger protein 723 NM_001349726.2 64.7% 56.4% (many diffs)
31 human 646864 ZNF723 zinc finger protein 723 XM_024451652.1 64.7% 56.4% (many diffs)
32 human 10793 ZNF273 zinc finger protein 273 NM_021148.2 64.5% 55.4% (many diffs)
33 human 163227 ZNF100 zinc finger protein 100 NM_001351670.2 64.3% 54% (many diffs)
34 human 170959 ZNF431 zinc finger protein 431 XM_011527750.2 64.3% 55.1% (many diffs)
35 human 163227 ZNF100 zinc finger protein 100 NM_001351669.2 61.2% 51.7% (many diffs)
36 human 163227 ZNF100 zinc finger protein 100 NM_173531.4 61.1% 51.6% (many diffs)
37 human 7594 ZNF43 zinc finger protein 43 NM_001256651.2 60.2% 50.5% (many diffs)
38 human 7594 ZNF43 zinc finger protein 43 NM_001256654.2 60.2% 50.5% (many diffs)
39 human 284443 ZNF493 zinc finger protein 493 NM_175910.7 58.1% 51% (many diffs)
40 human 284443 ZNF493 zinc finger protein 493 NM_001076678.3 57.7% 50.1% (many diffs)
41 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 55.8% 46.8% (many diffs)
42 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 55.8% 46.8% (many diffs)
43 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 55.8% 46.8% (many diffs)
44 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 55.8% 46.8% (many diffs)
45 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 55.8% 46.8% (many diffs)
46 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 55.8% 46.8% (many diffs)
47 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 55.8% 46.8% (many diffs)
48 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 55.8% 46.8% (many diffs)
49 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 55.8% 46.8% (many diffs)
50 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 55.8% 46.8% (many diffs)
51 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 55.8% 46.8% (many diffs)
52 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 55.8% 46.8% (many diffs)
53 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 55.8% 46.8% (many diffs)
54 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 55.8% 46.8% (many diffs)
55 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 55.8% 46.8% (many diffs)
56 human 340252 ZNF680 zinc finger protein 680 XM_017012126.1 55.7% 46.8% (many diffs)
57 human 340252 ZNF680 zinc finger protein 680 XM_017012127.1 55.7% 46.8% (many diffs)
58 human 340252 ZNF680 zinc finger protein 680 XM_017012128.1 55.7% 46.8% (many diffs)
59 human 340252 ZNF680 zinc finger protein 680 XM_024446743.1 55.7% 46.8% (many diffs)
60 human 340252 ZNF680 zinc finger protein 680 XM_024446744.1 55.7% 46.8% (many diffs)
61 human 340252 ZNF680 zinc finger protein 680 XM_024446745.1 55.7% 46.8% (many diffs)
62 human 340252 ZNF680 zinc finger protein 680 XM_024446746.1 55.7% 46.8% (many diffs)
63 human 340252 ZNF680 zinc finger protein 680 XM_024446747.1 55.7% 46.8% (many diffs)
64 human 340252 ZNF680 zinc finger protein 680 XM_024446748.1 55.7% 46.8% (many diffs)
65 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 55.4% 46.4% (many diffs)
66 human 163227 ZNF100 zinc finger protein 100 NM_001351672.2 54.8% 46.6% (many diffs)
67 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 54.8% 45.9% (many diffs)
68 human 148203 ZNF738 zinc finger protein 738 NM_001355237.2 38.6% 33% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1617
ORF length:
1551
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt agacaaaacc ccagttatgt gttctcattt tgcccaagat gtttggccag
121agcacagcat aaaagattct ttccaaaaag tgatactgag aacatatgga aaatatggac
181atgagaattt acagctaaga aaagaccata aaagtgtgga tgcatgtaag gtgtacaaag
241gaggttataa tggacttaac cagtgtttga caactactga cagcaagata tttcagtgtg
301ataaatatgt gaaagtcttt cataaatttc caaatgtaaa tagaaataag ataagacata
361ctggaaagaa acctttcaaa tgtaaaaacc gtggcaaatc attttgcatg ctttcacaat
421taactcaaca taagaaaatt catactagag agtattctta caaatgtgaa gaatgtggta
481aagcctttaa ctggtcctca acccttacta aacataagat aattcatact ggagaaaaac
541cctacaaatg tgaagaatgt ggcaaagctt ttaaccggtc ctcaaatctt actaaacata
601aaataattca tactggagag aaaccctaca aatgtgaaga atgtggcaaa gcttttaacc
661ggtcctcaac ccttactaaa cataaaagaa ttcatacaga agagaaaccc tacaaatgtg
721aagaatgtgg caaggccttt aaccagttct cgattcttaa taaacataag agaattcata
781tggaagataa accctacaaa tgtgaagaat gtggcaaagc ctttagagta ttctcaattc
841ttaaaaaaca taagataatc catactgggg aaaaaccata caaatgtgaa gaatgtggca
901aagcctttaa ccagttctca aaccttacta aacataagat aattcatact ggagagaaac
961cctacaaatg tgatgaatgt ggcaaagcct ttaaccagtc ctcaaccctt actaaacata
1021aaagaattca tacgggagaa aaaccctaca aatgtgaaga atgtggcaaa gcttttaaac
1081agtcctcaac ccttactgaa cataagataa ttcatactgg agagaaaccc tacaaatgtg
1141aaaaatgtgg caaggccttt agctggtcct cagcttttac taaacataag agaaaTCATA
1201TGGAAGATAA ACCCTACAAA TGTGAAGAAT GTGGCAAAGC CTTTAGTGTA TTCTCAACCC
1261TTACTAAACA TAAAATAATT CATACTAGAG AAAAACCCTA CAAATGTGAA GAATGTGGCA
1321AAGCCTTTAA CCGGTCCTCA ATTTTTACTA AACATAAGAT AATTCACACT GAAGGGAAAT
1381CCTACAAATG TGAAAAATGT GGCAATGCTT TTAACCAGTC CTCAAACCTT ACTGCACGTA
1441AGATAATTTA TACTGGAGAG AAACCCTACA AATATGAAGA ATGTGACAAA GCCTTTAACA
1501AGTTCTCAAC CCTTATTACA CATCAGATAA TTTATACTGG AGAGAAACCC TGCAAACATG
1561AATGTGGCAG AGCCTTTAAC AAATCCTCAA ATTATACTAA AGAGAAACTA CAAACCTGCC
1621CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1681TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1741ATATATCTTG TGGAAAGGAC GACCTGACTC CCTTTAAGTG TTCGTGACGC GTTAAGTCga
1801caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)