Construct: ORF TRCN0000476048

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016939.1_s317c1
Derived from:
ccsbBroadEn_11232
DNA Barcode:
TACTATCCCAATAGAAACACCTCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF85 (7639)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476048
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7639 ZNF85 zinc finger protein 85 XM_011528264.1 100% 100%
2 human 7639 ZNF85 zinc finger protein 85 NM_001256173.1 97.2% 96.4% (many diffs)
3 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 89.3% 86.2% (many diffs)
4 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 85% 83% (many diffs)
5 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 82.8% 81% (many diffs)
6 human 7562 ZNF708 zinc finger protein 708 NM_001297560.1 78.4% 68.6% (many diffs)
7 human 7562 ZNF708 zinc finger protein 708 NM_001297561.1 78.4% 68.6% (many diffs)
8 human 440519 ZNF724 zinc finger protein 724 NM_001355405.2 78.4% 67.7% (many diffs)
9 human 440519 ZNF724 zinc finger protein 724 XM_024451520.1 78.4% 67.7% (many diffs)
10 human 7562 ZNF708 zinc finger protein 708 XM_017027202.2 77.5% 68.6% (many diffs)
11 human 7562 ZNF708 zinc finger protein 708 XM_017027203.2 77.5% 68.6% (many diffs)
12 human 170959 ZNF431 zinc finger protein 431 NM_001319126.2 75.6% 65.8% (many diffs)
13 human 170959 ZNF431 zinc finger protein 431 NM_001319127.2 74.9% 65.4% (many diffs)
14 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 73.5% 61.4% (many diffs)
15 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 72.8% 60.8% (many diffs)
16 human 163227 ZNF100 zinc finger protein 100 NM_001351671.2 70.3% 59.3% (many diffs)
17 human 646864 ZNF723 zinc finger protein 723 XM_024451653.1 68% 58.5% (many diffs)
18 human 56242 ZNF253 zinc finger protein 253 NM_001331134.1 67.5% 55.7% (many diffs)
19 human 170959 ZNF431 zinc finger protein 431 NM_133473.4 65.5% 56.6% (many diffs)
20 human 170959 ZNF431 zinc finger protein 431 NM_001319124.2 65.4% 56.5% (many diffs)
21 human 163227 ZNF100 zinc finger protein 100 NM_001351670.2 64.5% 53.7% (many diffs)
22 human 646864 ZNF723 zinc finger protein 723 NM_001349726.2 63.8% 56% (many diffs)
23 human 646864 ZNF723 zinc finger protein 723 XM_024451652.1 63.8% 56% (many diffs)
24 human 170959 ZNF431 zinc finger protein 431 XM_011527750.2 63.8% 55.1% (many diffs)
25 human 7594 ZNF43 zinc finger protein 43 NM_001256651.2 60.1% 51.7% (many diffs)
26 human 7594 ZNF43 zinc finger protein 43 NM_001256654.2 60.1% 51.7% (many diffs)
27 human 284443 ZNF493 zinc finger protein 493 NM_175910.7 57.3% 49.5% (many diffs)
28 human 51427 ZNF107 zinc finger protein 107 NM_001013746.3 57% 48.7% (many diffs)
29 human 51427 ZNF107 zinc finger protein 107 NM_016220.5 57% 48.7% (many diffs)
30 human 51427 ZNF107 zinc finger protein 107 XM_017012283.2 57% 48.7% (many diffs)
31 human 51427 ZNF107 zinc finger protein 107 XM_017012285.2 57% 48.7% (many diffs)
32 human 51427 ZNF107 zinc finger protein 107 XM_017012286.1 57% 48.7% (many diffs)
33 human 51427 ZNF107 zinc finger protein 107 NM_001282360.1 56.1% 46.9% (many diffs)
34 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 55.8% 48% (many diffs)
35 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 55.8% 48% (many diffs)
36 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 55.8% 48% (many diffs)
37 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 55.8% 48% (many diffs)
38 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 55.8% 48% (many diffs)
39 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 55.8% 48% (many diffs)
40 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 55.8% 48% (many diffs)
41 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 55.8% 48% (many diffs)
42 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 55.8% 48% (many diffs)
43 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 55.8% 48% (many diffs)
44 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 55.8% 48% (many diffs)
45 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 55.8% 48% (many diffs)
46 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 55.8% 48% (many diffs)
47 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 55.8% 48% (many diffs)
48 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 55.8% 48% (many diffs)
49 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 55.4% 47.6% (many diffs)
50 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 54.8% 47.1% (many diffs)
51 human 340252 ZNF680 zinc finger protein 680 XM_017012126.1 53.7% 45.8% (many diffs)
52 human 340252 ZNF680 zinc finger protein 680 XM_017012127.1 53.7% 45.8% (many diffs)
53 human 340252 ZNF680 zinc finger protein 680 XM_017012128.1 53.7% 45.8% (many diffs)
54 human 340252 ZNF680 zinc finger protein 680 XM_024446743.1 53.7% 45.8% (many diffs)
55 human 340252 ZNF680 zinc finger protein 680 XM_024446744.1 53.7% 45.8% (many diffs)
56 human 340252 ZNF680 zinc finger protein 680 XM_024446745.1 53.7% 45.8% (many diffs)
57 human 340252 ZNF680 zinc finger protein 680 XM_024446746.1 53.7% 45.8% (many diffs)
58 human 340252 ZNF680 zinc finger protein 680 XM_024446747.1 53.7% 45.8% (many diffs)
59 human 340252 ZNF680 zinc finger protein 680 XM_024446748.1 53.7% 45.8% (many diffs)
60 human 51427 ZNF107 zinc finger protein 107 NM_001282359.1 53.1% 44.9% (many diffs)
61 human 163227 ZNF100 zinc finger protein 100 NM_001351672.2 52.8% 44.9% (many diffs)
62 human 7697 ZNF138 zinc finger protein 138 NM_001367572.1 41.2% 33.7% (many diffs)
63 human 7697 ZNF138 zinc finger protein 138 NM_001271639.2 37.3% 30.6% (many diffs)
64 human 105372319 LOC105372319 zinc finger protein 430-like XM_017027571.1 29.6% 21.1% (many diffs)
65 human 7697 ZNF138 zinc finger protein 138 NM_001271649.2 27.7% 22.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1677
ORF length:
1608
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gagcctcagc gcccagccct cttcaagttt ttataaacca gtttcagaag
121ttatgtgttc tcattttgcc caagaccttt ggccggagca gaatataaaa gattctttcc
181aaaaagtgac actgaaaaga tatggaaaat gtagacatga aaatttacca ttaagaaaag
241gctgtgaaag tatggatgag tgtaagatgc acaaaggagg ttgtaatgga cttaaccaat
301gtctcacagc tacccagagc aaaatatttc aatgtgataa atatgtaaaa gtcgctcata
361aattttcaaa ttcaaacaga catgagataa gacatactaa aaagaaacct ttcaaatgta
421caaaatgtgg caaatcattt ggcatgattt catgcctaac tgaacatagc agaattcata
481ctagagtaaa tttctacaaa tgtgaagaat gtggaaaagc ctttaactgg tcctcaaccc
541ttactaaaca taagagaatt catacgggag agaaacctta caaatgtgaa gaatgtggta
601aagcctttaa ccagtcctca aaccttatta aacataagaa aattcatact ggagagaaac
661cctacaaatg tgaagaatgt ggcaaaactt ttaaccgatt ctcaactctt actacccata
721agataattca tactggagag aaaccctaca aatgtaaaga atgtggtaaa gcttttaacc
781gatcttcaac ccttactacc catagaaaaa ttcatactgg agagaaacct tacaaatgtg
841aagaatgtgg caaagccttt aagcagtcct caaaccttac tacacataag ataattcata
901ctggagagaa accctacaaa tgtaaaaaat gtggaaaagc ctttaaccag tctgcacacc
961ttaccacaca tgaggtaatt catactggag agaaacccta caaatgtgaa aaatgtggaa
1021aagcctttaa tcatttctca caccttacta cacataagat aattcatact ggagagaaac
1081cttacaaatg taaagaatgt ggtaaagctt ttaaacactc ttcaaccctt actaaacata
1141agataattca tactggagag aagccttaca aatgtaaaga atgtgaaaaa gcttttaacc
1201aatcctcaaa acttactgaa cataagaaaa ttcatactgg agagaaaccc tatgaatgtg
1261aaaaatgtgg caaagctttt aaccagtcct caaatcttac tagacataag aaaagtcata
1321cagaagagaa aCCTTACAAA TGTGAAGAAT GTGGCAAAGG TTTTAAATGG CCCTCAACCC
1381TTACTATCCA TAAGATAATT CATACTGGAG AGAAACCATA CAAATGTGAA GAATGTGGCA
1441AAGCTTTTAA CCAATCCTCA AAACTTACCA AACATAAGAA AATTCATACT GGAGAGAAAC
1501CCTACACATG TGAAGAATGT GGCAAAGCCT TTAACCAGTC CTCAAACCTT ACTAAACATA
1561AGAGAATTCA TACTGGAGAA AAACCTTACA AATGTGAAGA ATGTGACAAA GCTTTTAAAT
1621GGTCCTCAGT CCTTACTAAA CATAAGATAA TTCATACCGG AGAAAAATTA CAAATATTGC
1681CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1741TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1801ATATATCTTG TGGAAAGGAC GATACTATCC CAATAGAAAC ACCTCCACGC GTTAAGTCga
1861caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)