Construct: ORF ccsbBroadEn_02599

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015201.1_s300c1, BRDN0000456501
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LILRA1 (11024)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11024 LILRA1 leukocyte immunoglobulin li... NM_006863.4 100% 100%
2 human 11024 LILRA1 leukocyte immunoglobulin li... NM_001278319.1 89.7% 89.5% 1314T>A;1315_1316insC;1317_1318ins149
3 human 11027 LILRA2 leukocyte immunoglobulin li... NM_001130917.3 87.5% 79.1% (many diffs)
4 human 11027 LILRA2 leukocyte immunoglobulin li... XM_011526385.1 87.5% 79.1% (many diffs)
5 human 11027 LILRA2 leukocyte immunoglobulin li... NM_006866.4 84.5% 76.1% (many diffs)
6 human 10859 LILRB1 leukocyte immunoglobulin li... NM_001278399.2 82.9% 75.5% (many diffs)
7 human 11027 LILRA2 leukocyte immunoglobulin li... NM_001290270.1 82.2% 73.9% (many diffs)
8 human 11027 LILRA2 leukocyte immunoglobulin li... XM_011526387.1 82.2% 73.9% (many diffs)
9 human 11026 LILRA3 leukocyte immunoglobulin li... NM_006865.4 82.2% 76.4% (many diffs)
10 human 10288 LILRB2 leukocyte immunoglobulin li... NM_001278406.2 81.5% 75.3% (many diffs)
11 human 10288 LILRB2 leukocyte immunoglobulin li... NM_001278405.2 81.3% 73.5% (many diffs)
12 human 11027 LILRA2 leukocyte immunoglobulin li... NM_001290271.2 79.5% 66.6% (many diffs)
13 human 11027 LILRA2 leukocyte immunoglobulin li... XM_006722986.1 79.5% 66.6% (many diffs)
14 human 11027 LILRA2 leukocyte immunoglobulin li... XM_011526388.1 78.4% 69.9% (many diffs)
15 human 11027 LILRA2 leukocyte immunoglobulin li... XM_011526386.1 77.3% 64.5% (many diffs)
16 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026192.1 77.2% 70.3% (many diffs)
17 human 10288 LILRB2 leukocyte immunoglobulin li... NM_005874.5 71.7% 63.1% (many diffs)
18 human 11026 LILRA3 leukocyte immunoglobulin li... NM_001172654.2 70.3% 65.8% (many diffs)
19 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026191.1 70.2% 63.3% (many diffs)
20 human 10859 LILRB1 leukocyte immunoglobulin li... XM_011526336.2 70% 63% (many diffs)
21 human 10288 LILRB2 leukocyte immunoglobulin li... NM_001080978.4 70% 63.2% (many diffs)
22 human 10288 LILRB2 leukocyte immunoglobulin li... NM_001278403.2 70% 63.2% (many diffs)
23 human 11024 LILRA1 leukocyte immunoglobulin li... NR_103503.1 69.8% (many diffs)
24 human 10859 LILRB1 leukocyte immunoglobulin li... XM_011526335.2 68.8% 61.8% (many diffs)
25 human 10859 LILRB1 leukocyte immunoglobulin li... NM_001278398.2 68.8% 57.6% (many diffs)
26 human 11027 LILRA2 leukocyte immunoglobulin li... XM_011526390.1 67.9% 52.8% (many diffs)
27 human 10859 LILRB1 leukocyte immunoglobulin li... XR_935716.2 67.5% (many diffs)
28 human 10859 LILRB1 leukocyte immunoglobulin li... NM_001081638.3 64.7% 58.3% (many diffs)
29 human 10859 LILRB1 leukocyte immunoglobulin li... NM_001081637.2 64.6% 58.2% (many diffs)
30 human 10859 LILRB1 leukocyte immunoglobulin li... NM_006669.6 64.5% 58% (many diffs)
31 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026185.1 64.5% 58% (many diffs)
32 human 10859 LILRB1 leukocyte immunoglobulin li... NM_001081639.3 64.4% 57.9% (many diffs)
33 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026182.2 63.7% 57.4% (many diffs)
34 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026183.2 63.6% 57.2% (many diffs)
35 human 10859 LILRB1 leukocyte immunoglobulin li... XM_011526332.3 63.5% 56.9% (many diffs)
36 human 10859 LILRB1 leukocyte immunoglobulin li... XM_011526331.2 63.4% 56.9% (many diffs)
37 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026184.2 63.3% 56.7% (many diffs)
38 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026188.1 63.1% 56.8% (many diffs)
39 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026186.1 63% 56.7% (many diffs)
40 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026187.1 63% 56.7% (many diffs)
41 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026190.1 62.9% 56.6% (many diffs)
42 human 10859 LILRB1 leukocyte immunoglobulin li... XM_017026189.1 62.8% 56.5% (many diffs)
43 human 11024 LILRA1 leukocyte immunoglobulin li... NR_103502.1 62.7% (many diffs)
44 human 11027 LILRA2 leukocyte immunoglobulin li... XM_017026224.1 61.5% 49.8% (many diffs)
45 human 11027 LILRA2 leukocyte immunoglobulin li... XM_011526389.1 60.5% 49.6% (many diffs)
46 human 11024 LILRA1 leukocyte immunoglobulin li... NM_001278318.2 59.1% 59.1% 659_660ins600
47 human 10288 LILRB2 leukocyte immunoglobulin li... NM_001278404.2 55% 47.5% (many diffs)
48 human 11027 LILRA2 leukocyte immunoglobulin li... XM_011526391.1 48.7% 35.8% (many diffs)
49 human 10859 LILRB1 leukocyte immunoglobulin li... NR_103518.2 46.2% (many diffs)
50 human 10288 LILRB2 leukocyte immunoglobulin li... NR_103521.3 44.7% (many diffs)
51 human 11024 LILRA1 leukocyte immunoglobulin li... NR_103501.2 42.5% (many diffs)
52 human 10859 LILRB1 leukocyte immunoglobulin li... XR_002958244.1 39.6% (many diffs)
53 human 10859 LILRB1 leukocyte immunoglobulin li... XR_001753590.2 39.6% (many diffs)
54 human 10859 LILRB1 leukocyte immunoglobulin li... XR_001753591.1 37.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1536
ORF length:
1467
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GACCCCCATC GTCACAGTCC TGATCTGTCT CAGGCTGAGT CTGGGCCCCC
121GGACCCACGT GCAGGCAGGG ACCCTCCCCA AGCCCACACT CTGGGCTGAG CCAGGCTCTG
181TGATCACCCA GGGGAGTCCC GTGACCCTCT GGTGTCAGGG GATCCTGGAG ACCCAGGAGT
241ACCGTCTGTA TAGAGAAAAG AAAACAGCAC CCTGGATTAC ACGGATCCCA CAGGAGATTG
301TGAAGAAGGG CCAGTTCCCC ATCCCATCCA TCACCTGGGA ACACACAGGG CGGTATCGCT
361GTTTCTACGG TAGCCACACT GCAGGCTGGT CAGAGCCCAG TGACCCCCTG GAGCTGGTGG
421TGACAGGAGC CTACATCAAA CCCACCCTCT CAGCTCTACC CAGCCCTGTG GTGACCTCAG
481GAGGGAACGT GACCCTCCAT TGTGTCTCAC AGGTGGCATT TGGCAGCTTC ATTCTGTGTA
541AGGAAGGAGA AGATGAACAC CCACAATGCC TGAACTCACA GCCCCGTACC CATGGGTGGT
601CCCGGGCCAT CTTCTCTGTG GGCCCCGTGA GCCCGAGTCG CAGGTGGTCG TACAGGTGCT
661ATGCTTATGA CTCGAACTCT CCCCATGTGT GGTCTCTACC CAGTGATCTC CTGGAGCTCC
721TGGTCCTAGG TGTTTCTAAG AAGCCATCAC TCTCAGTGCA GCCAGGTCCT ATAGTGGCCC
781CTGGGGAGAG CCTGACCCTC CAGTGTGTTT CTGATGTCAG CTACGACAGA TTTGTTCTGT
841ATAAGGAGGG AGAACGTGAC TTCCTCCAGC TCCCTGGCCC ACAGCCCCAG GCTGGGCTCT
901CCCAGGCCAA CTTCACCCTG GGCCCTGTGA GCCGCTCCTA CGGGGGCCAG TACAGATGCT
961CCGGTGCATA CAACCTCTCC TCCGAGTGGT CGGCCCCCAG CGACCCCCTG GACATCCTGA
1021TCGCAGGACA GTTCCGTGGC AGACCCTTCA TCTCGGTGCA TCCGGGCCCC ACGGTGGCCT
1081CAGGAGAGAA CGTGACCCTG CTGTGTCAGT CATGGGGGCC GTTCCACACT TTCCTTCTGA
1141CCAAGGCGGG AGCAGCTGAT GCCCCCCTCC GTCTCAGATC AATACACGAA TATCCTAAGT
1201ACCAGGCTGA ATTCCCTATG AGTCCTGTGA CCTCAGCCCA CTCGGGGACC TACAGGTGCT
1261ACGGCTCACT CAGCTCCAAC CCCTACCTGC TGTCTCACCC CAGTGACTCC CTGGAGCTCA
1321TGGTCTCAGG AGCAGCTGAG ACCCTCAGCC CACCACAAAA CAAGTCCGAT TCCAAGGCTG
1381GAGCAGCTAA CACCCTCAGC CCATCACAAA ACAAGACTGC CTCACACCCC CAGGATTACA
1441CAGTGGAGAA TCTCATCCGC ATGGGCATAG CTGGCTTGGT CCTGGTGGTC CTCGGGATTC
1501TGCTATTTGA GGCTCAGCAC AGCCAGAGAA GCCTCTTGCC AACTTTCTTG TACAAAGTTG
1561Gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)