Construct: ORF TRCN0000466950

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001645.1_s317c1
Derived from:
ccsbBroadEn_10024
DNA Barcode:
AAAAATGGGCGCTCTGAGACACAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF680 (340252)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466950
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 340252 ZNF680 zinc finger protein 680 NM_178558.5 99.8% 99.6% 989A>G;1569T>C;1573A>G
2 human 340252 ZNF680 zinc finger protein 680 XM_006715959.2 92% 91.8% (many diffs)
3 human 340252 ZNF680 zinc finger protein 680 XM_024446742.1 85% 84.9% (many diffs)
4 human 646864 ZNF723 zinc finger protein 723 NM_001349726.2 82.7% 71.3% (many diffs)
5 human 646864 ZNF723 zinc finger protein 723 XM_024451652.1 82.7% 71.3% (many diffs)
6 human 10793 ZNF273 zinc finger protein 273 NM_021148.2 80.3% 70.6% (many diffs)
7 human 646864 ZNF723 zinc finger protein 723 XM_024451653.1 79.7% 68.8% (many diffs)
8 human 10793 ZNF273 zinc finger protein 273 XM_024446635.1 76.8% 67.1% (many diffs)
9 human 10793 ZNF273 zinc finger protein 273 XM_024446636.1 76.8% 67.1% (many diffs)
10 human 10793 ZNF273 zinc finger protein 273 XM_024446637.1 76.8% 67.1% (many diffs)
11 human 10793 ZNF273 zinc finger protein 273 XM_024446638.1 76.8% 67.1% (many diffs)
12 human 10793 ZNF273 zinc finger protein 273 XM_024446639.1 76.8% 67.1% (many diffs)
13 human 10793 ZNF273 zinc finger protein 273 XM_024446640.1 76.8% 67.1% (many diffs)
14 human 10793 ZNF273 zinc finger protein 273 XM_024446641.1 76.8% 67.1% (many diffs)
15 human 80264 ZNF430 zinc finger protein 430 NM_001172671.2 75.8% 65.7% (many diffs)
16 human 80264 ZNF430 zinc finger protein 430 NM_025189.4 75.7% 65.6% (many diffs)
17 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 75.1% 63.4% (many diffs)
18 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 75% 65.5% (many diffs)
19 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 73.9% 63.9% (many diffs)
20 human 7562 ZNF708 zinc finger protein 708 XM_017027204.2 72.9% 60.8% (many diffs)
21 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 70.4% 61% (many diffs)
22 human 168374 ZNF92 zinc finger protein 92 NM_001287532.1 70.2% 61.1% (many diffs)
23 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 70.2% 59.1% (many diffs)
24 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 69.3% 58.1% (many diffs)
25 human 388523 ZNF728 zinc finger protein 728 NM_001267716.2 69.1% 58.6% (many diffs)
26 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 68.8% 59.6% (many diffs)
27 human 148213 ZNF681 zinc finger protein 681 NM_138286.3 67.3% 57.8% (many diffs)
28 human 168374 ZNF92 zinc finger protein 92 NM_007139.4 64.6% 55.1% (many diffs)
29 human 168374 ZNF92 zinc finger protein 92 NM_001287533.2 63.6% 54.2% (many diffs)
30 human 168374 ZNF92 zinc finger protein 92 NM_001287534.2 63.6% 54.2% (many diffs)
31 human 340252 ZNF680 zinc finger protein 680 XM_017012126.1 63.5% 63.3% (many diffs)
32 human 340252 ZNF680 zinc finger protein 680 XM_017012127.1 63.5% 63.3% (many diffs)
33 human 340252 ZNF680 zinc finger protein 680 XM_017012128.1 63.5% 63.3% (many diffs)
34 human 340252 ZNF680 zinc finger protein 680 XM_024446743.1 63.5% 63.3% (many diffs)
35 human 340252 ZNF680 zinc finger protein 680 XM_024446744.1 63.5% 63.3% (many diffs)
36 human 340252 ZNF680 zinc finger protein 680 XM_024446745.1 63.5% 63.3% (many diffs)
37 human 340252 ZNF680 zinc finger protein 680 XM_024446746.1 63.5% 63.3% (many diffs)
38 human 340252 ZNF680 zinc finger protein 680 XM_024446747.1 63.5% 63.3% (many diffs)
39 human 340252 ZNF680 zinc finger protein 680 XM_024446748.1 63.5% 63.3% (many diffs)
40 human 284443 ZNF493 zinc finger protein 493 NM_001076678.3 59.3% 48.1% (many diffs)
41 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 56.4% 47.5% (many diffs)
42 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 55.5% 46.6% (many diffs)
43 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 54.9% 45.9% (many diffs)
44 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 54.9% 45.9% (many diffs)
45 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 54.9% 45.9% (many diffs)
46 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 54.9% 45.9% (many diffs)
47 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 54.9% 45.9% (many diffs)
48 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 54.9% 45.9% (many diffs)
49 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 54.9% 45.9% (many diffs)
50 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 54.9% 45.9% (many diffs)
51 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 54.9% 45.9% (many diffs)
52 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 54.9% 45.9% (many diffs)
53 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 54.9% 45.9% (many diffs)
54 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 54.9% 45.9% (many diffs)
55 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 54.9% 45.9% (many diffs)
56 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 54.9% 45.9% (many diffs)
57 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 54.9% 45.9% (many diffs)
58 human 148203 ZNF738 zinc finger protein 738 NM_001355237.2 54.7% 46.5% (many diffs)
59 human 340252 ZNF680 zinc finger protein 680 XR_428175.4 53.8% (many diffs)
60 human 51427 ZNF107 zinc finger protein 107 NM_001282359.1 51.3% 44.3% (many diffs)
61 human 340252 ZNF680 zinc finger protein 680 XR_001744687.1 51% (many diffs)
62 human 340252 ZNF680 zinc finger protein 680 XR_002956428.1 50.6% (many diffs)
63 human 340252 ZNF680 zinc finger protein 680 XR_002956429.1 50.5% (many diffs)
64 human 7594 ZNF43 zinc finger protein 43 NM_001256651.2 48.4% 40% (many diffs)
65 human 7594 ZNF43 zinc finger protein 43 NM_001256654.2 48.4% 40% (many diffs)
66 human 284443 ZNF493 zinc finger protein 493 NM_175910.7 44.7% 35% (many diffs)
67 human 7757 ZNF208 zinc finger protein 208 NM_007153.3 34.7% 29.3% (many diffs)
68 human 10793 ZNF273 zinc finger protein 273 NR_003099.1 31.2% (many diffs)
69 human 340252 ZNF680 zinc finger protein 680 NM_001130022.1 19.9% 17.9% (many diffs)
70 human 340252 ZNF680 zinc finger protein 680 XM_017012129.1 19.6% 18% (many diffs)
71 human 284443 ZNF493 zinc finger protein 493 NM_145326.3 16% 14% (many diffs)
72 human 9534 ZNF254 zinc finger protein 254 NM_001278665.2 15.1% 13.5% (many diffs)
73 human 7639 ZNF85 zinc finger protein 85 NM_001256172.2 14.1% 12.6% (many diffs)
74 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 13.3% 12.4% (many diffs)
75 human 7697 ZNF138 zinc finger protein 138 NM_001367577.1 13.2% 11.3% (many diffs)
76 human 51427 ZNF107 zinc finger protein 107 XM_024446791.1 12.8% 12.2% (many diffs)
77 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 12.7% 11.6% (many diffs)
78 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 10.6% 7.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1656
ORF length:
1590
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcc aggaccacct ggaagcctag aaatgggacc actgacattt agggatgtgg
121ccatagaatt ctctctggag gagtggcaat gcctggacac tgcacaacgg aatttatata
181ggaaagtgat gtttgagaac tacagaaacc tggtcttcct gggtattgct gtctctaagc
241ctcacctgat aacctgtttg gagcaaggaa aagagccctg gaataggaag agacaggaga
301tggtagccaa acccccagtt atatattctc atttcactga agacctttgg ccagagcata
361gcataaaaga ttcttttcaa aaagtgatac tgagaggata tggaaaatgt ggacatgaga
421atttacaatt aagaataagt tgtaaaagtg tggatgagtc taaggtgttc aaagaaggtt
481ataatgaact taaccaatgt ttgagaacta cccagagcaa aatatttcaa tgtgataaat
541acgtgaaagt ctttcataaa ttttcaaatt caaacagtca taagaaaaga aatactggaa
601agaaggtttt caaatgtaaa gaatgtggca aatcattttg catgctttca catctaacac
661aacatataag aattcacact agagagaatt cttacaaatg tgaggaatgt ggcaaagttc
721ttaactggtt ctcagagctt attaaacata agggaattca tatgggagag aaaccctaca
781aatgtgagga atgtggcaaa gcctttaacc aatcctcaac ccttattaaa cataagaaaa
841ttcatattga agagaaaccc ttcaaatgtg aagaatgtgg caaagccttt agtttattct
901caatccttag taaacataag ataattcata ctggagacaa accttacaaa tgtgatgaat
961gtcacaaagc ctttaactgg tttgcaaccc ttactaacca taagagaatt catactggag
1021agaaaccctt caaatgtgaa gaatgtggca aaggctttaa ccagttttca aaccttacta
1081aacataagaa aattcatact ggagagaaac cctacaaatg tgaagaatgt ggcaaagctt
1141ttaaccagtt tgcaaacctt actagacata agaaaattca tactggagag aaatcctaca
1201aatgtgaaga atgcggcaaa gcttttatac agtcctcaaa ccttactgaa catatgagaa
1261ttcatactgg agagaaaccc tacaaatgtg aagaatgtgg caaagctttt aatgggtgct
1321ccagccTTAC TCGACATAAG AGAATTCACA CTAGAGAGAA TACCTACAAA TGTGAAGAAT
1381GTGGCAAAGG CTTTACTTTA TTTTCAACCC TTACTAACCA TAAAGTAATT CATACTGGAG
1441AGAAATCCTA CAAATGTGAT GAATGTGGCA ATGTTTTTAA CTGGCCTGCA ACTCTTGCTA
1501ATCATAAGAG AATTCATGCT AGAGAGAAAC CCTACAAATG TGAAGAATGT GGCAAAGCTT
1561TTAACCGGTC CTCACACCTT ACTAGACATA AGAAAATTCA TACTGGTGAG AAACTCTACA
1621AACCTGAAAA ATGCGACGAT AATTTTGATA ACACCTACCC AACTTTCTTG TACAAAGTGG
1681TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
1741CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
1801AAAAAATGGG CGCTCTGAGA CACACACGCG TTAAGTCgac aatcaacctc tggattacaa
1861aatttgtgaa agatt

Download FASTA (ORF) (Full)