Construct: ORF ccsbBroadEn_02188

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016274.1_s300c1, BRDN0000391277
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF254 (9534)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9534 ZNF254 zinc finger protein 254 NM_203282.4 100% 100%
2 human 9534 ZNF254 zinc finger protein 254 NM_001278661.1 93.7% 93.7% 0_1ins123
3 human 9534 ZNF254 zinc finger protein 254 NM_001278662.2 93.7% 93.7% 0_1ins123
4 human 9534 ZNF254 zinc finger protein 254 NM_001278677.2 93.7% 93.7% 0_1ins123
5 human 9534 ZNF254 zinc finger protein 254 XM_011528443.1 93.7% 93.7% 0_1ins123
6 human 9534 ZNF254 zinc finger protein 254 XM_011528444.2 93.7% 93.7% 0_1ins123
7 human 9534 ZNF254 zinc finger protein 254 XM_017027515.1 93.7% 93.7% 0_1ins123
8 human 9534 ZNF254 zinc finger protein 254 XM_017027517.1 89.4% 87.8% (many diffs)
9 human 9534 ZNF254 zinc finger protein 254 NM_001278664.1 88.9% 88.9% 0_1ins219
10 human 9534 ZNF254 zinc finger protein 254 XM_017027518.1 88.9% 88.9% 0_1ins219
11 human 9534 ZNF254 zinc finger protein 254 XM_017027519.1 88.9% 88.9% 0_1ins219
12 human 9534 ZNF254 zinc finger protein 254 NM_001278663.2 87.1% 87.1% 0_1ins255
13 human 9534 ZNF254 zinc finger protein 254 NM_001278678.1 87.1% 87.1% 0_1ins255
14 human 9534 ZNF254 zinc finger protein 254 XM_011528448.3 87.1% 87.1% 0_1ins255
15 human 730087 ZNF726 zinc finger protein 726 NM_001244038.2 82% 75.7% (many diffs)
16 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 76.5% 67.2% (many diffs)
17 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 73.2% 64.4% (many diffs)
18 human 148198 ZNF98 zinc finger protein 98 NM_001098626.2 73% 65.5% (many diffs)
19 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 72.9% 64.3% (many diffs)
20 human 113835 ZNF257 zinc finger protein 257 NM_033468.4 72.1% 62.8% (many diffs)
21 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 72.1% 63.5% (many diffs)
22 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 71.6% 62.6% (many diffs)
23 human 170959 ZNF431 zinc finger protein 431 NM_133473.4 70.1% 59.8% (many diffs)
24 human 170959 ZNF431 zinc finger protein 431 NM_001319124.2 70% 59.7% (many diffs)
25 human 80264 ZNF430 zinc finger protein 430 NM_001172671.2 69.3% 60.2% (many diffs)
26 human 80264 ZNF430 zinc finger protein 430 NM_025189.4 69.2% 60.1% (many diffs)
27 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 68.9% 58.7% (many diffs)
28 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 68.1% 58% (many diffs)
29 human 170959 ZNF431 zinc finger protein 431 XM_011527750.2 67.9% 58.4% (many diffs)
30 human 10793 ZNF273 zinc finger protein 273 NM_021148.2 67.8% 59% (many diffs)
31 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 67.4% 57.4% (many diffs)
32 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 67.4% 57.4% (many diffs)
33 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 67.4% 57.4% (many diffs)
34 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 67.4% 57.4% (many diffs)
35 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 67.4% 57.4% (many diffs)
36 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 67.4% 57.4% (many diffs)
37 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 67.4% 57.4% (many diffs)
38 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 67.4% 57.4% (many diffs)
39 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 67.4% 57.4% (many diffs)
40 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 67.4% 57.4% (many diffs)
41 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 67.4% 57.4% (many diffs)
42 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 67.4% 57.4% (many diffs)
43 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 67.4% 57.4% (many diffs)
44 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 67.4% 57.4% (many diffs)
45 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 67.4% 57.4% (many diffs)
46 human 57615 ZNF492 zinc finger protein 492 NM_020855.3 67.4% 60.2% (many diffs)
47 human 163227 ZNF100 zinc finger protein 100 NM_001351669.2 65.2% 57.2% (many diffs)
48 human 163227 ZNF100 zinc finger protein 100 NM_173531.4 65.1% 57.1% (many diffs)
49 human 170959 ZNF431 zinc finger protein 431 NM_001319126.2 61.9% 52.4% (many diffs)
50 human 170959 ZNF431 zinc finger protein 431 NM_001319127.2 61.2% 52.1% (many diffs)
51 human 440515 ZNF506 zinc finger protein 506 NM_001145404.2 53.5% 43.3% (many diffs)
52 human 7644 ZNF91 zinc finger protein 91 NM_003430.4 49% 43.6% (many diffs)
53 human 7644 ZNF91 zinc finger protein 91 NM_001300951.2 46.5% 41.3% (many diffs)
54 human 7644 ZNF91 zinc finger protein 91 XM_011528265.3 45.8% 40.6% (many diffs)
55 human 7644 ZNF91 zinc finger protein 91 XM_017027235.1 45.8% 40.6% (many diffs)
56 human 7644 ZNF91 zinc finger protein 91 XM_017027236.1 43.3% 38.1% (many diffs)
57 human 388524 RPSAP58 ribosomal protein SA pseudo... NR_149350.2 42.6% (many diffs)
58 human 163227 ZNF100 zinc finger protein 100 NM_001351672.2 42.5% 35.9% (many diffs)
59 human 388524 RPSAP58 ribosomal protein SA pseudo... NR_149351.2 41.3% (many diffs)
60 human 7644 ZNF91 zinc finger protein 91 XM_006722880.4 41.3% 36.4% (many diffs)
61 human 7644 ZNF91 zinc finger protein 91 XM_011528266.2 41.3% 36.4% (many diffs)
62 human 7644 ZNF91 zinc finger protein 91 XR_001753756.2 34.8% (many diffs)
63 human 7644 ZNF91 zinc finger protein 91 XR_001753755.2 25.6% (many diffs)
64 human 7644 ZNF91 zinc finger protein 91 XR_001753754.2 19.8% (many diffs)
65 human 7644 ZNF91 zinc finger protein 91 XM_024451693.1 15.5% 12% (many diffs)
66 human 7644 ZNF91 zinc finger protein 91 XR_002958354.1 14.5% (many diffs)
67 human 730087 ZNF726 zinc finger protein 726 NM_001348687.2 14.2% 10.9% (many diffs)
68 human 9534 ZNF254 zinc finger protein 254 NM_001278665.2 13.5% 12.8% (many diffs)
69 human 730087 ZNF726 zinc finger protein 726 NM_001348688.2 12.2% 10.5% (many diffs)
70 human 7639 ZNF85 zinc finger protein 85 NM_001256172.2 11.5% 9.7% (many diffs)
71 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 10.9% 10.4% (many diffs)
72 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 10.7% 10.1% (many diffs)
73 human 51427 ZNF107 zinc finger protein 107 XM_024446791.1 10% 9.4% (many diffs)
74 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 8.3% 5.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2046
ORF length:
1977
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCCAGGACCC CCTAGAAGCC TAGAAATGGG ACTGTTGACA TTTAGGGATG
121TGGCCATAGA ATTCTCTCTG GAGGAGTGGC AACACCTGGA CATTGCACAG CAGAATTTAT
181ATAGAAATGT GATGTTAGAG AACTACAGAA ACCTGGCCTT CCTGGGTATT GCTGTCTCTA
241AGCCAGACCT GATCACCTGT CTGGAACAAG GGAAAGAGCC CTGGAATATG AAGCGACATG
301AGATGGTGGA TGAACCCCCA GGTATGTGTC CTCATTTTGC TCAAGACCTT TGGCCAGAGC
361AGGGCATGGA AGATTCTTTT CAAAAAGCAA TACTGAGAAG ATATGGAAAA TATGGACATG
421AGAATTTACA GTTAAGAAAA GGCTGTAAAA GTGTGGATGA GTATAAGGTG AACAAAGAAG
481GTTATAATGG ACTTAACCAG TGTTTCACAA CTGCCCAGAG CAAAGTATTT CAATGTGATA
541AATATTTGAA AGTCTTCTAT AAATTTTTAA ATTCAAACAG ACCTAAGATA AGACATACTG
601AAAAGAAATC TTTCAAATGT AAAAAACGTG TCAAATTATT TTGCATGCTT TCACATAAAA
661CCCAACACAA AAGCATTTAT CATAGAGAGA AGTCCTACAA ATGTAAAGAA TGTGGAAAAA
721CCTTTAATTG GTCCTCAACC CTTACTAATC ATAGGAAAAT TTATACTGAA GAGAAACCTT
781ACAAATGTGA AGAATATAAC AAATCTCCTA AGCAACTCTC AACCCTTACT ACACATGAAA
841TAATTCATGC TGGAGAGAAA CTCTACAAAT GTGAAGAATG TGGTGAAGCT TTTAATCGAT
901CCTCAAATCT TACTACACAT AAGATAATTC ATACTGGAGA GAAACCTTAC AAGTGTGAAG
961AATGTGGCAA AGCATTTATC TGGTCCTCAA CCCTTACTGA GCATAAGAAA ATTCATACTA
1021GAAAGAAACC CTACAAGTGT GAAGAATGTG GCAAAGCATT TATATGGTCC TCAACACTAA
1081CTAGACATAA GAGGATGCAC ACTGGAGAGA AACCCTACAA ATGTGAAGAA TGTGGCAAAG
1141CTTTTAGCCA GTCCTCAACC CTTACTACAC ATAAGATAAT TCATACTGGA GAGAAACGCT
1201ACAAATGCTT AGAATGTGGC AAAGCTTTTA AGCAACTCTC AACTCTTACT ACACATAAAA
1261TAATTCATGT TGGAGAGAAA CTCTACAAAT GTGAAGAATG CGGCAAAGGT TTTAATCGAT
1321CTTCAAATCT TACTACACAT AAGATAATTC ATACTGGAGA GAAACCTTAC AAGTGTGAAG
1381AATGTGGCAA AGCATTTATC TGGTCCTCAA CCCTTACTAA ACATAAGAGA ATTCATACTA
1441GAGAGAAACC CTACAAATGT GAAGAATGTG GCAAGGCATT TATATGGTCC TCAACCCTAA
1501CTAGACATAA GAGGATGCAC ACTGGAGAGA AACCCTACAA ATGTGAAGAA TGTGGCAAAT
1561CTTTTAGCCA ATCCTCAACC CTTACTACAC ATAAGATAAT TCATACTGGA GAGAAACCCT
1621ACAAATGTGA AGAATGTGGC AAAGCCTTTA ACTGGTCCTC AACTCTTACT AAACATAAGA
1681TAATTCATAC TGAAGAGAAA CCCTACAAAT GTGAAAAATG TGGCAAAGCC TTTAAGCAGT
1741CTTCAATCCT TACTAACCAT AAGAGAATTC ATACTGGAGA GAAACCCTAT AAATGTGAAG
1801AATGTGGCAA ATCTTTTAAC CGGTCTTCAA CTTTTACTAA ACATAAGGTA ATTCATACTG
1861GAGTAAAACC CTACAAATGT GAAGAATGTG GCAAAGCATT TTTCTGGTCC TCAACCCTAA
1921CTAAACATAA GAGAATTCAT ACTGGAGAGC AACCCTACAA ATGGGAAAAA TTTGGCAAAG
1981CCTTTAATCG GTCCTCGCAC CTCACCACAG ATAAGATAAC TCATTGGAGA GAAATCTTAC
2041AAGTATTGCC AACTTTCTTG TACAAAGTtg gcattataag aaagcattgc ttatcaattt
2101gttgcaacga ac

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