Construct: ORF ccsbBroadEn_14615

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018941.1_s300c1, BRDN0000458237
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
DLG1 (1739)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1739 DLG1 discs large MAGUK scaffold ... NM_001363865.1 98.4% 23% (many diffs)
2 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366207.1 98.4% 23% (many diffs)
3 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366210.1 98.4% 23% (many diffs)
4 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366215.1 98.4% 23% (many diffs)
5 human 1739 DLG1 discs large MAGUK scaffold ... NM_001204386.1 98.2% 23% (many diffs)
6 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366205.1 98.2% 23% (many diffs)
7 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366213.1 98.2% 23% (many diffs)
8 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366211.1 96.4% 23.3% (many diffs)
9 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366217.1 96.4% 23.3% (many diffs)
10 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366206.1 96.4% 21.1% (many diffs)
11 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005811.2 96.4% 21.1% (many diffs)
12 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005812.1 96.4% 21.1% (many diffs)
13 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005813.1 96.4% 21.1% (many diffs)
14 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366220.1 96.3% 21.1% (many diffs)
15 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366204.1 95.6% 23.6% (many diffs)
16 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366208.1 95.6% 23.6% (many diffs)
17 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366209.1 95.6% 23.6% (many diffs)
18 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366212.1 95.6% 23.6% (many diffs)
19 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005819.1 95.6% 23.6% (many diffs)
20 human 1739 DLG1 discs large MAGUK scaffold ... NM_004087.2 94.9% 22.2% (many diffs)
21 human 1739 DLG1 discs large MAGUK scaffold ... XM_005269289.4 94.9% 22.2% (many diffs)
22 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005800.1 94.9% 22.2% (many diffs)
23 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005801.1 94.9% 22.2% (many diffs)
24 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005802.1 94.9% 22.2% (many diffs)
25 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005803.1 94.9% 22.2% (many diffs)
26 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366214.1 94.8% 22.2% (many diffs)
27 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366203.1 94.5% 21.4% (many diffs)
28 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366216.1 93.7% 21.6% (many diffs)
29 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366219.1 93.7% 21.6% (many diffs)
30 human 1739 DLG1 discs large MAGUK scaffold ... NM_001098424.1 92.3% 22.7% (many diffs)
31 human 1739 DLG1 discs large MAGUK scaffold ... NM_001290983.1 92.3% 22.7% (many diffs)
32 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366218.1 92.3% 22.7% (many diffs)
33 human 1739 DLG1 discs large MAGUK scaffold ... XM_011512502.3 92.3% 22.7% (many diffs)
34 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005821.2 85.9% 7.6% (many diffs)
35 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005823.2 84.8% 5.7% (many diffs)
36 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366221.1 84% 7.7% (many diffs)
37 human 1739 DLG1 discs large MAGUK scaffold ... NM_001366222.1 83.3% 7.8% (many diffs)
38 human 1739 DLG1 discs large MAGUK scaffold ... NM_001204387.1 82.9% 5.8% (many diffs)
39 human 1739 DLG1 discs large MAGUK scaffold ... NM_001204388.1 82.1% 5.9% (many diffs)
40 human 1739 DLG1 discs large MAGUK scaffold ... XM_011512509.2 61.6% 37.1% (many diffs)
41 human 1739 DLG1 discs large MAGUK scaffold ... XR_924108.3 59.2% (many diffs)
42 human 1739 DLG1 discs large MAGUK scaffold ... XM_017005824.2 57% 4.1% (many diffs)
43 human 1739 DLG1 discs large MAGUK scaffold ... XR_001740043.2 50.3% (many diffs)
44 human 1739 DLG1 discs large MAGUK scaffold ... NR_158764.1 50.1% (many diffs)
45 human 1739 DLG1 discs large MAGUK scaffold ... XR_001740036.2 49.6% (many diffs)
46 human 1739 DLG1 discs large MAGUK scaffold ... XR_001740037.2 49.4% (many diffs)
47 human 1739 DLG1 discs large MAGUK scaffold ... XR_001740039.2 49.4% (many diffs)
48 human 1739 DLG1 discs large MAGUK scaffold ... XR_001740044.2 49.4% (many diffs)
49 human 1739 DLG1 discs large MAGUK scaffold ... XR_001740038.2 49.3% (many diffs)
50 human 1739 DLG1 discs large MAGUK scaffold ... NR_158765.1 48.9% (many diffs)
51 human 1739 DLG1 discs large MAGUK scaffold ... NR_158766.1 48.7% (many diffs)
52 human 1739 DLG1 discs large MAGUK scaffold ... NR_158767.1 48.6% (many diffs)
53 human 1739 DLG1 discs large MAGUK scaffold ... XR_001740040.2 48.1% (many diffs)
54 mouse 13383 Dlg1 discs, large homolog 1 (Dro... NM_001252433.1 88.8% 21.1% (many diffs)
55 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521767.3 88.3% 20.8% (many diffs)
56 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316866.1 87% 21.5% (many diffs)
57 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316872.1 86.8% 21.2% (many diffs)
58 mouse 13383 Dlg1 discs, large homolog 1 (Dro... NM_001252434.1 86.4% 21.6% (many diffs)
59 mouse 13383 Dlg1 discs, large homolog 1 (Dro... NM_007862.3 85.8% 20.3% (many diffs)
60 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316865.1 85.7% 20.4% (many diffs)
61 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521763.3 85.2% 20.2% (many diffs)
62 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521761.3 85.2% 20.1% (many diffs)
63 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521762.3 85.1% 20.1% (many diffs)
64 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521765.3 84.1% 20.6% (many diffs)
65 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521766.3 83.9% 20.7% (many diffs)
66 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521764.3 83.7% 20.4% (many diffs)
67 mouse 13383 Dlg1 discs, large homolog 1 (Dro... NM_001252435.1 83.3% 20.8% (many diffs)
68 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521768.3 83.3% 20.8% (many diffs)
69 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521769.2 78.1% 7.5% (many diffs)
70 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316869.1 77.3% 10.6% (many diffs)
71 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316870.1 77.2% 10.6% (many diffs)
72 mouse 13383 Dlg1 discs, large homolog 1 (Dro... NM_001252436.1 76.9% 7.7% (many diffs)
73 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521771.2 76.1% 5.7% (many diffs)
74 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521770.3 75.8% 10% (many diffs)
75 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316867.1 75.5% 7.8% (many diffs)
76 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521772.2 74.9% 5.8% (many diffs)
77 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316868.1 74.7% 5.9% (many diffs)
78 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_006521773.2 74.1% 5.9% (many diffs)
79 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XM_017316871.1 73.2% 6% (many diffs)
80 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XR_384523.3 59.2% (many diffs)
81 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XR_001781789.1 56.9% (many diffs)
82 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XR_001781790.1 56.7% (many diffs)
83 mouse 13383 Dlg1 discs, large homolog 1 (Dro... XR_001781788.1 48.8% (many diffs)
84 mouse 13383 Dlg1 discs, large homolog 1 (Dro... NR_045516.1 48.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
85
ORF end:
730
ORF length:
645
Sequence:
1ATGGGATAGT GGACCTGTTC GTTGCAACAA ATTGATGAGC AATGCTTTTT TATAATGCCA
61ACTTTGTACA AAAAAGTTGG CACCATGCCG GTCCGGAAGC AAGATACCCA GAGAGCATTG
121CACCTTTTGG AGGAATATCG TTCAAAACTA AGCCAAACTG AAGACAGACA GCTCAGAAGT
181TCCATAGAAC GGGTTATTAA CATATTTCAG AGCAACCTCT TTCAGGCTTT AATAGATATT
241CAAGAATTTT ATGAAGTGAC CTTACTGGAT AATCCAAAAT GTATAGATCG TTCAAAGCCG
301TCTGAACCAA TTCAACCTGT GAATACTTGG GAGATTTCCA GCCTTCCAAG CTCTACTGTG
361ACTTCAGAGA CACTGCCAAG CAGCCTTAGC CCTAGTGTAG AGAAATACAG GTATCAGGAT
421GAAGATACAC CTCCTCAAGA GCATATTTCC CCACAAATCA CAAATGAAGT GATAGGTCCA
481GAATTGGTTC ATGTCTCAGA GAAGAACTTA TCAGAGATTG AGAATGTCCA TGGATTTGTT
541TCTCATTCTC ATATTTCACC AATAAAGGCA AATCCTCCCC CAGTACTGGT CAACACAGAT
601AGCTTGAAAA CACCAACTTA CGTTAATGGC ACAGATGCAG ATTATGAATA TGAAGAAATC
661ACACTTGAAA GGGGAAATTC AGGGCTTGGT TTCAGCATTG CAGAGTACGG ACAACCCACA
721CATTGGAGAT GACTCAAGTA TTTTCATTAC CAAAATTATC ACAGGGGAGC AGCCGCCCAA
781GATGGGAAGa ttgcgggtca atgactgtat attacaagta aatgaagtag atgttcgtga
841tgtaacacat agcaaagcag ttgaagcgtt gaaagaagca gggtctattg tacgcttgta
901tgtaaaaaga aggaaaccag tgtcagaaaa aataatggaa ataaagctca ttaaaggtcc
961taaaggtctt gggtttagca ttgctggagg tgttggaaat cagcatattc ctggggataa
1021tagcatctat gtaaccaaaa taattgaagg aggtgcagca cataaggatg gcaaacttca
1081gattggagat aaacttttag cagtgaataa cgtatgttta gaagaagtta ctcatgaaga
1141agcagtaact gccttaaaga acacatctga ttttgtttat ttgaaagtgg caaaacccac
1201aagtatgtat atgaatgatg gctatgcacc acctgatatc accaactctt cttctcagcc
1261tgttgataac catgttagcc catcttcctt cttgggccag acaccagcat ctccagccag
1321atactcccca gtttctaaag cagtacttgg agatgatgaa attacaaggg aacctagaaa
1381agttgttctt catcgtggct caacgggcct tggtttcaac attgtaggag gagaagatgg
1441agaaggaata tttatttcct ttatcttagc cggaggacct gctgatctaa gtggagagct
1501cagaaaagga gatcgtatta tatcggtaaa cagtgttgac ctcagagctg ctagtcatga
1561gcaggcagca gctgcattga aaaatgctgg ccaggctgtc acaattgttg cacaatatcg
1621acctgaagaa tacagtcgtt ttgaagctaa aatacatgat ttacgggagc agatgatgaa
1681tagtagtatt agttcagggt caggttctct tcgaactagc cagaagcgat ccctctatgt
1741cagagccctt tttgattatg acaagactaa agacagtggg cttcccagtc agggactgaa
1801cttcaaattt ggagatatcc tccatgttat taatgcttct gatgatgaat ggtggcaagc
1861caggcaggtt acaccagatg gtgagagcga tgaggtcgga gtgattccca gtaaacgcag
1921agttgagaag aaagaacgag cccgattaaa aacagtgaaa ttcaattcta aaacgagaga
1981taaagggcag tcattcaatg acaagcgtaa aaagaacctc ttttcccgaa aattcccctt
2041ctacaagaac aaggaccaga gtgagcagga aacaagtgat gctCACAAGT ATGTATATGA
2101ATGATGGCTA TGCACCACCT GATATCACCA ACTGTGGTCA AGAAGAATAC GTCTTATCTT
2161ATGAACCAGT GAATCAACAA GAAGTTAATT ATACTCGACC AGTGATCATA TTGGGACCTA
2221TGAAAGACAG GATAAATGAT GACTTGATCT CAGAATTTCC TGACAAATTT GGATCCTGTG
2281TTCCTCATAC AACTAGACCA AAACGAGATT ATGAGGTAGA TGGAAGAGAT TATCATTTTG
2341TGACTTCAAG AGAGCAGATG GAAAAAGATA TCCAGGAACA TAAATTCATT GAAGCTGGCC
2401AGTATAACAA TCATCTATAT GGAACAAGTG TTCAGTCTGT ACGAGAAGTA GCAGAAAAGG
2461GCAAACACTG TATCCTTGAT GTGTCTGGAA ATGCCATAAA GAGATTACAG ATTGCACAGC
2521TTTACCCTAT CTCCATTTTT ATTAAACCCA AATCCATGGA AAATATCATG GAAATGAATA
2581AGCGTCTAAC AGAAGAACAA GCCAGAAAAA CATTTGAGAG AGCCATGAAA CTGGAACAGG
2641AGTTTACTGA ACATTTCACA GCTATTGTAC AGGGGGATAC GCTGGAAGAC ATTTACAACC
2701AAGTGAAACA GATCATAGAA GAACAATCTG GTTCTTACAT CTGGGTTCCG GCAAAAGAAA
2761AGCTATTGCC AACTTTCTTG TACAAAGTTG GCATTATAAG AAAGCATTGC TTATCAATTT
2821GTTGCAACGA ACAGGTCACT ATCAGTCAAA ATAAAATCAT ATTTCCATCC CCCACCGTTT
2881GAC

Download FASTA (ORF) (Full)