Construct: ORF TRCN0000475452

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011834.1_s317c1
Derived from:
ccsbBroadEn_07157
DNA Barcode:
TAAAACTTCAACTTGGTTTCCTTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF43 (7594)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475452
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 99.9% 99.8% 12G>A;688T>C
2 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
3 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
4 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
5 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
6 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
7 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
8 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
9 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
10 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
11 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
12 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
13 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
14 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
15 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
16 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 99.2% 99.1% 0_1insATGGGACCATTAACATTT;670T>C
17 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 98.8% 98.7% 1_27del;39G>A;715T>C
18 human 7594 ZNF43 zinc finger protein 43 NM_001256651.2 91.9% 91.8% 0_1ins195;493T>C
19 human 7594 ZNF43 zinc finger protein 43 NM_001256654.2 91.9% 91.8% 0_1ins195;493T>C
20 human 51427 ZNF107 zinc finger protein 107 NM_001282359.1 78.3% 66% (many diffs)
21 human 51427 ZNF107 zinc finger protein 107 NM_001282360.1 75.1% 62.8% (many diffs)
22 human 148213 ZNF681 zinc finger protein 681 NM_138286.3 68.5% 57.6% (many diffs)
23 human 9534 ZNF254 zinc finger protein 254 NM_203282.4 68% 58% (many diffs)
24 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 66.9% 59% (many diffs)
25 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 66.2% 58.3% (many diffs)
26 human 81931 ZNF93 zinc finger protein 93 NM_031218.4 65.4% 56.2% (many diffs)
27 human 388523 ZNF728 zinc finger protein 728 NM_001267716.2 65.3% 55.5% (many diffs)
28 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 63.7% 55.9% (many diffs)
29 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 63% 53.7% (many diffs)
30 human 7562 ZNF708 zinc finger protein 708 XM_017027204.2 62.5% 54.8% (many diffs)
31 human 163223 ZNF676 zinc finger protein 676 NM_001001411.3 61.7% 53% (many diffs)
32 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 61.4% 53.8% (many diffs)
33 human 171392 ZNF675 zinc finger protein 675 NM_138330.3 61% 52% (many diffs)
34 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 60.6% 53.8% (many diffs)
35 human 7617 ZNF66 zinc finger protein 66 NM_001355197.2 60.5% 52.9% (many diffs)
36 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 60.4% 52.9% (many diffs)
37 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 59.9% 53.1% (many diffs)
38 human 168374 ZNF92 zinc finger protein 92 NM_001287532.1 59.5% 50.6% (many diffs)
39 human 440519 ZNF724 zinc finger protein 724 NM_001355405.2 59.3% 51.7% (many diffs)
40 human 440519 ZNF724 zinc finger protein 724 XM_024451520.1 59.3% 51.7% (many diffs)
41 human 148198 ZNF98 zinc finger protein 98 NM_001098626.2 58.8% 51.2% (many diffs)
42 human 646864 ZNF723 zinc finger protein 723 XM_024451653.1 58.5% 49.8% (many diffs)
43 human 113835 ZNF257 zinc finger protein 257 NM_033468.4 58.4% 49.2% (many diffs)
44 human 100129842 ZNF737 zinc finger protein 737 XM_005259697.4 58.4% 48.6% (many diffs)
45 human 100129842 ZNF737 zinc finger protein 737 XM_011527598.3 58.4% 48.6% (many diffs)
46 human 100129842 ZNF737 zinc finger protein 737 XM_006722597.4 58% 50% (many diffs)
47 human 100129842 ZNF737 zinc finger protein 737 XM_011527599.3 58% 50% (many diffs)
48 human 100129842 ZNF737 zinc finger protein 737 NM_001159293.2 57.4% 50.5% (many diffs)
49 human 199777 ZNF626 zinc finger protein 626 NM_001076675.3 56.8% 46.4% (many diffs)
50 human 7639 ZNF85 zinc finger protein 85 NM_001256173.1 56.4% 49.1% (many diffs)
51 human 170959 ZNF431 zinc finger protein 431 NM_133473.4 56.3% 47.3% (many diffs)
52 human 170959 ZNF431 zinc finger protein 431 NM_001319124.2 56.3% 47.3% (many diffs)
53 human 340252 ZNF680 zinc finger protein 680 NM_178558.5 55.6% 46.6% (many diffs)
54 human 168374 ZNF92 zinc finger protein 92 NM_007139.4 55.4% 46.6% (many diffs)
55 human 7639 ZNF85 zinc finger protein 85 XM_011528264.1 55.4% 47.7% (many diffs)
56 human 170959 ZNF431 zinc finger protein 431 XM_011527750.2 55.3% 46.4% (many diffs)
57 human 80264 ZNF430 zinc finger protein 430 NM_001172671.2 54.9% 45% (many diffs)
58 human 80264 ZNF430 zinc finger protein 430 NM_025189.4 54.8% 44.9% (many diffs)
59 human 168374 ZNF92 zinc finger protein 92 NM_001287533.2 54.7% 45.9% (many diffs)
60 human 168374 ZNF92 zinc finger protein 92 NM_001287534.2 54.7% 45.9% (many diffs)
61 human 646864 ZNF723 zinc finger protein 723 NM_001349726.2 54.5% 47.3% (many diffs)
62 human 646864 ZNF723 zinc finger protein 723 XM_024451652.1 54.5% 47.3% (many diffs)
63 human 100129842 ZNF737 zinc finger protein 737 XM_017026116.1 53.9% 47.3% (many diffs)
64 human 10793 ZNF273 zinc finger protein 273 NM_021148.2 53.7% 46.3% (many diffs)
65 human 100129543 ZNF730 zinc finger protein 730 NM_001277403.2 53.6% 46.3% (many diffs)
66 human 7562 ZNF708 zinc finger protein 708 NM_001297560.1 53.4% 46.7% (many diffs)
67 human 7562 ZNF708 zinc finger protein 708 NM_001297561.1 53.4% 46.7% (many diffs)
68 human 100129543 ZNF730 zinc finger protein 730 XM_017026115.2 52.9% 45.7% (many diffs)
69 human 100129543 ZNF730 zinc finger protein 730 XM_017026114.1 52.8% 45.6% (many diffs)
70 human 340252 ZNF680 zinc finger protein 680 XM_006715959.2 52.6% 43.8% (many diffs)
71 human 7562 ZNF708 zinc finger protein 708 XM_017027202.2 52.1% 45.6% (many diffs)
72 human 7562 ZNF708 zinc finger protein 708 XM_017027203.2 52.1% 45.6% (many diffs)
73 human 100129842 ZNF737 zinc finger protein 737 XM_017026117.2 51% 43.4% (many diffs)
74 human 170959 ZNF431 zinc finger protein 431 NM_001319126.2 50.7% 42.5% (many diffs)
75 human 170959 ZNF431 zinc finger protein 431 NM_001319127.2 50.3% 42.1% (many diffs)
76 human 340252 ZNF680 zinc finger protein 680 XM_024446742.1 48.5% 40.1% (many diffs)
77 human 340252 ZNF680 zinc finger protein 680 XM_017012126.1 35.6% 29.4% (many diffs)
78 human 340252 ZNF680 zinc finger protein 680 XM_017012127.1 35.6% 29.4% (many diffs)
79 human 340252 ZNF680 zinc finger protein 680 XM_017012128.1 35.6% 29.4% (many diffs)
80 human 340252 ZNF680 zinc finger protein 680 XM_024446743.1 35.6% 29.4% (many diffs)
81 human 340252 ZNF680 zinc finger protein 680 XM_024446744.1 35.6% 29.4% (many diffs)
82 human 340252 ZNF680 zinc finger protein 680 XM_024446745.1 35.6% 29.4% (many diffs)
83 human 340252 ZNF680 zinc finger protein 680 XM_024446746.1 35.6% 29.4% (many diffs)
84 human 340252 ZNF680 zinc finger protein 680 XM_024446747.1 35.6% 29.4% (many diffs)
85 human 340252 ZNF680 zinc finger protein 680 XM_024446748.1 35.6% 29.4% (many diffs)
86 human 163227 ZNF100 zinc finger protein 100 NM_001351672.2 34.6% 28.6% (many diffs)
87 human 7639 ZNF85 zinc finger protein 85 NM_001256172.2 9.4% 8.2% (many diffs)
88 human 730087 ZNF726 zinc finger protein 726 NM_001348688.2 9.4% 8% (many diffs)
89 human 9534 ZNF254 zinc finger protein 254 NM_001278665.2 8.9% 7.9% (many diffs)
90 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 8.8% 8.5% (many diffs)
91 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 8.5% 7.6% (many diffs)
92 human 51427 ZNF107 zinc finger protein 107 XM_024446791.1 8.4% 7.7% (many diffs)
93 human 148203 ZNF738 zinc finger protein 738 NM_001355241.2 7.8% 7% (many diffs)
94 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 6.9% 5.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2493
ORF length:
2427
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggg accattaaca tttatggatg tggccataga attctgtctg gaggagtggc
121aatgcctgga cattgcacag cagaatttat ataggaatgt gatgttagag aactacagaa
181acctggtctt cctgggtatt gctgtctcta agccagacct gatcacctgt ctggagcaag
241aaaaagagcc ttgggagcct atgaggagac atgaaatggt agccaaaccc ccagttatgt
301gttctcattt tacccaagac ttttggccag agcagcatat aaaagatcct ttccaaaaag
361cgacactgag aagatataaa aactgtgaac ataaaaatgt acatttaaaa aaagaccata
421aaagtgtgga tgagtgtaag gtgcacagag gaggttataa tggatttaac caatgtttgc
481cagctaccca gagcaaaata tttctatttg ataaatgtgt gaaagccttt cataaatttt
541caaattcaaa cagacataag ataagccata ctgaaaaaaa acttttcaaa tgcaaagaat
601gtggcaaatc attttgcatg cttccacatc tagctcaaca taaaataatt cataccagag
661tgaatttctg caaatgtgaa aaatgtggaa aagcttttaa ctgcccttca atcatcacta
721aacataagag aattaatact ggagagaaac cccacacatg tgaagaatgt ggcaaagtct
781ttaattggtc ctcacgcctt actacacata aaaaaaatta tactagatac aaactctaca
841aatgtgaaga atgtggcaaa gcttttaaca agtcctcaat ccttactacc cataagataa
901ttcgcactgg agagaaattc tacaaatgta aagaatgtgc caaagctttt aaccaatcct
961caaaccttac tgaacataag aaaattcatc ctggagagaa accttacaaa tgtgaagaat
1021gtggcaaagc ctttaactgg ccctcaactc ttactaaaca taagagaatt catactggag
1081agaaacccta cacatgtgaa gaatgtggca aagcctttaa ccagttctca aaccttacta
1141cacataagag aatccatact gcagagaaat tctataaatg tacagaatgt ggtgaagctt
1201ttagccggtc ctcaaacctt actaaacata agaaaattca tactgaaaag aaaccctaca
1261aatgtgaaga atgtggcaaa gcttttaagt ggtcctcaaa gcttactgaa cataagttaa
1321ctcatactgg agagaaaccc tacaaatgtg aagaatgtgg caaagccttt aactggccct
1381caacccttac taaacataac agaattcata ctggagagaa accctacaaa tgtgaagtat
1441gtggcaaagc ctttaaccag ttctcaaacc ttactacaca taagagaatt catactgcag
1501aaaaaccgta caaatgtgaa gaatgtggca aagcttttag ccggtcctca aaccttacta
1561aacataagaa aattcacatt gaaaagaaac cctacaaatg tgaagaatgt ggcaaagctt
1621ttaagtggtc ctcaaagctt actgaacata agataactca tactggagag aaaccctaca
1681aatgtgaaga atgtggcaaa gcttttaacc atttctcaat ccttaccaaa cataagagga
1741ttcatactgg agagaaaccc tacaagtgtg aagaatgtgg caaagctttt acccaatcct
1801caaaccttac tacacataag aaaattcata ctggagagaa attctacaaa tgtgaagaat
1861gtggcaaagc ttttacccaa tcttcaaacc ttactacaca taaaaaaatt catactggag
1921gaaaacccta caaatgtgaa gaatgtggca aagcttttaa ccagttctca actcttacta
1981aacataagat aattcacact gaggagaaac cctacaaatg tgaagaatgt ggcaaagcct
2041ttaagtggtc ctcaaccctt actaaacata agataattca tactggagag aaaccctaca
2101aatgtgaaga atgtggcaaa gcttttaaac tgtcctcaac cctttctaca cataagatta
2161ttcatactgg agagaaaccc tacaaatgtg aaaaatgtgg caaagctttt aaccgatcct
2221caaaccttat tgaacataag aaaattcata cTGGAGAGCA ACCCTACAAA TGTGAAGAAT
2281GTGGCAAAGC ATTTAACTAT TCCTCACACC TTAATACACA TAAGAGAATT CATACTAAAG
2341AGCAACCCTA CAAATGTAAA GAATGTGGCA AAGCTTTCAA CCAATATTCA AACCTTACTA
2401CACATAACAA AATTCATACT GGAGAGAAAC TCTACAAACC TGAAGATGTG ACAGTGATTT
2461TGACAACACC TCAAACTTTT TCAAACATAA AATACCCAAC TTTCTTGTAC AAAGTGGTTG
2521ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
2581GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGATA
2641AAACTTCAAC TTGGTTTCCT TCACGCGTTA AGTCgacaat caacctctgg attacaaaat
2701ttgtgaaaga tt

Download FASTA (ORF) (Full)