Construct: ORF TRCN0000478280

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003079.2_s317c1
Derived from:
ccsbBroadEn_14339
DNA Barcode:
ACGAGTTCACTGTCATGACCAACC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
ZNF765 (91661)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478280
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 388561 ZNF761 zinc finger protein 761 NM_001289953.1 73.6% 2.8% (many diffs)
2 human 7576 ZNF28 zinc finger protein 28 NM_001369768.1 71.1% 4% (many diffs)
3 human 162967 ZNF320 zinc finger protein 320 XM_024451399.1 57.8% 3.2% (many diffs)
4 human 7576 ZNF28 zinc finger protein 28 NM_001369766.1 49.1% 2.6% (many diffs)
5 human 162967 ZNF320 zinc finger protein 320 NM_001351777.1 45.6% 2.5% (many diffs)
6 human 162967 ZNF320 zinc finger protein 320 XM_024451398.1 45.6% 2.5% (many diffs)
7 human 90333 ZNF468 zinc finger protein 468 NM_001277120.2 45.1% 2.3% (many diffs)
8 human 7576 ZNF28 zinc finger protein 28 NM_001369761.1 43.8% 2.3% (many diffs)
9 human 162967 ZNF320 zinc finger protein 320 XM_024451396.1 20.9% 1.1% (many diffs)
10 human 162967 ZNF320 zinc finger protein 320 XM_024451397.1 20.9% 1.1% (many diffs)
11 human 388561 ZNF761 zinc finger protein 761 NR_110551.2 16.7% (many diffs)
12 human 55762 ZNF701 zinc finger protein 701 NM_018260.2 12.3% .8% (many diffs)
13 human 170958 ZNF525 zinc finger protein 525 NM_001348156.2 11.8% .6% (many diffs)
14 human 162967 ZNF320 zinc finger protein 320 NM_001351773.1 11.2% .5% (many diffs)
15 human 162967 ZNF320 zinc finger protein 320 NM_001351774.2 11.2% .5% (many diffs)
16 human 162967 ZNF320 zinc finger protein 320 NM_001351775.2 11.2% .5% (many diffs)
17 human 162967 ZNF320 zinc finger protein 320 NM_001351776.2 11.2% .5% (many diffs)
18 human 162967 ZNF320 zinc finger protein 320 NM_207333.3 11.2% .5% (many diffs)
19 human 90333 ZNF468 zinc finger protein 468 NM_001008801.2 10.9% .3% (many diffs)
20 human 55762 ZNF701 zinc finger protein 701 NM_001172655.1 10.7% .7% (many diffs)
21 human 55762 ZNF701 zinc finger protein 701 XM_011527092.1 10.7% .7% (many diffs)
22 human 91661 ZNF765 zinc finger protein 765 NM_001040185.3 10.7% .5% (many diffs)
23 human 90333 ZNF468 zinc finger protein 468 XM_017027443.1 10% .3% (many diffs)
24 human 126017 ZNF813 zinc finger protein 813 NM_001004301.4 9.1% .4% (many diffs)
25 human 170958 ZNF525 zinc finger protein 525 NR_145447.2 8.6% (many diffs)
26 human 91661 ZNF765 zinc finger protein 765 NR_146721.1 8.5% (many diffs)
27 human 388559 ZNF888 zinc finger protein 888 NM_001310127.1 7.9% .4% (many diffs)
28 human 388559 ZNF888 zinc finger protein 888 XM_005259451.5 7.9% .4% (many diffs)
29 human 388559 ZNF888 zinc finger protein 888 XM_017026799.2 7.9% .4% (many diffs)
30 human 7576 ZNF28 zinc finger protein 28 NM_001369764.1 7.7% .2% (many diffs)
31 human 170958 ZNF525 zinc finger protein 525 NR_145446.2 7.6% (many diffs)
32 human 388561 ZNF761 zinc finger protein 761 NM_001008401.4 7.5% .4% (many diffs)
33 human 388561 ZNF761 zinc finger protein 761 NM_001289951.2 7.5% .4% (many diffs)
34 human 388561 ZNF761 zinc finger protein 761 NM_001289952.1 7.5% .4% (many diffs)
35 human 110116772 ZNF765-ZNF761 ZNF765-ZNF761 readthrough NM_001350496.2 7.5% .4% (many diffs)
36 human 55786 ZNF415 zinc finger protein 415 XM_006723267.1 7.4% .3% (many diffs)
37 human 79788 ZNF665 zinc finger protein 665 NM_001353459.2 7.4% .4% (many diffs)
38 human 79788 ZNF665 zinc finger protein 665 NM_024733.5 7.4% .4% (many diffs)
39 human 7576 ZNF28 zinc finger protein 28 NM_006969.5 7.4% .2% (many diffs)
40 human 7576 ZNF28 zinc finger protein 28 XM_011527262.2 7.4% .2% (many diffs)
41 human 84436 ZNF528 zinc finger protein 528 XM_017027362.1 7.1% .4% (many diffs)
42 human 84436 ZNF528 zinc finger protein 528 XM_017027363.2 7.1% .4% (many diffs)
43 human 84436 ZNF528 zinc finger protein 528 XM_017027364.1 7.1% .4% (many diffs)
44 human 162967 ZNF320 zinc finger protein 320 XR_002958279.1 7% (many diffs)
45 human 162967 ZNF320 zinc finger protein 320 XR_002958278.1 6.9% (many diffs)
46 human 388559 ZNF888 zinc finger protein 888 XM_017026798.2 6.9% .2% (many diffs)
47 human 162967 ZNF320 zinc finger protein 320 XR_002958277.1 6.9% (many diffs)
48 human 162967 ZNF320 zinc finger protein 320 XR_002958275.1 6.6% (many diffs)
49 human 162967 ZNF320 zinc finger protein 320 XR_002958276.1 6.6% (many diffs)
50 human 84436 ZNF528 zinc finger protein 528 XM_017027360.1 6.3% .4% (many diffs)
51 human 84436 ZNF528 zinc finger protein 528 XM_017027361.1 6.3% .4% (many diffs)
52 human 162967 ZNF320 zinc finger protein 320 XR_001753616.2 6.3% (many diffs)
53 human 55762 ZNF701 zinc finger protein 701 XR_001753718.2 5.7% (many diffs)
54 human 84671 ZNF347 zinc finger protein 347 NM_001172674.1 5.7% .3% (many diffs)
55 human 91664 ZNF845 zinc finger protein 845 NM_001321522.1 5.7% .2% (many diffs)
56 human 91664 ZNF845 zinc finger protein 845 NM_001321523.1 5.7% .2% (many diffs)
57 human 91664 ZNF845 zinc finger protein 845 NM_001321524.1 5.7% .2% (many diffs)
58 human 91664 ZNF845 zinc finger protein 845 NM_138374.3 5.7% .2% (many diffs)
59 human 55762 ZNF701 zinc finger protein 701 XR_001753717.2 4.8% (many diffs)
60 human 55762 ZNF701 zinc finger protein 701 XR_001753715.2 4.8% (many diffs)
61 human 55762 ZNF701 zinc finger protein 701 XR_001753716.2 4.5% (many diffs)
62 human 90333 ZNF468 zinc finger protein 468 NR_102301.2 3.6% (many diffs)
63 human 90333 ZNF468 zinc finger protein 468 NR_102300.2 3.5% (many diffs)
64 human 90333 ZNF468 zinc finger protein 468 NR_102299.2 3.5% (many diffs)
65 human 7576 ZNF28 zinc finger protein 28 NR_163139.1 3.4% (many diffs)
66 human 170958 ZNF525 zinc finger protein 525 NR_145445.2 3.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
90
ORF end:
111
ORF length:
21
Sequence:
1TCAGACAGTG GTTCAAAGTT TTTTTCTTCC ATTTCAGGTG TCGTGAGGCT AGCATCGATT
61GATCAACAAG TTTGTACAAA AAAGTTGGCA TGGCTCTCCT CAGGGTCTAT TGACATTCAG
121GGATGTGGCC ATAGAATTCT CTCAGGAGGA GTGGAAATGC CTGGACCCTG CTCAGAGGAC
181TCTATACAGG GACGTGATGC TGGAGAATTA TAGGAACCTG GTCTCCCTGG AGTTGTCAGG
241GGAGTGTCCA TTGACAGCAC CTGCCTCCTG CCCAACTTTC TTGTACAAAG TGGTTGATAT
301CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC
361GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGAACGAGT
421TCACTGTCAT GACCAACCAC GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt
481gaaagatt

Download FASTA (ORF) (Full)

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