Construct: ORF ccsbBroadEn_15273

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015895.1_s300c1, BRDN0000386549
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF100 (163227)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 163227 ZNF100 zinc finger protein 100 NM_173531.4 99.8% 99.8% 1166C>T;1599C>T
2 human 163227 ZNF100 zinc finger protein 100 NM_001351669.2 99.6% 99.6% 222_223insGCA;1163C>T;1596C>T
3 human 163227 ZNF100 zinc finger protein 100 NM_001351670.2 93.7% 93.7% 222_223ins99;1067C>T;1500C>T
4 human 80264 ZNF430 zinc finger protein 430 NM_025189.4 85.9% 78.4% (many diffs)
5 human 80264 ZNF430 zinc finger protein 430 NM_001172671.2 85.8% 78.2% (many diffs)
6 human 170959 ZNF431 zinc finger protein 431 NM_001319124.2 82.1% 73.3% (many diffs)
7 human 170959 ZNF431 zinc finger protein 431 NM_133473.4 81.9% 73.1% (many diffs)
8 human 163227 ZNF100 zinc finger protein 100 NM_001351671.2 81.2% 81.1% 0_1ins303;863C>T;1296C>T
9 human 170959 ZNF431 zinc finger protein 431 XM_011527750.2 79.8% 71.3% (many diffs)
10 human 148198 ZNF98 zinc finger protein 98 NM_001098626.2 74.7% 63.5% (many diffs)
11 human 100129842 ZNF737 zinc finger protein 737 NM_001159293.2 74.7% 64.5% (many diffs)
12 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 72.2% 61.8% (many diffs)
13 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 71.4% 61% (many diffs)
14 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 70.8% 60.6% (many diffs)
15 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 70.2% 60.1% (many diffs)
16 human 100129842 ZNF737 zinc finger protein 737 XM_017026116.1 70% 60.1% (many diffs)
17 human 7562 ZNF708 zinc finger protein 708 XM_017027204.2 69.4% 59.4% (many diffs)
18 human 57615 ZNF492 zinc finger protein 492 NM_020855.3 69% 58.6% (many diffs)
19 human 113835 ZNF257 zinc finger protein 257 NM_001316996.2 68.5% 58.7% (many diffs)
20 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 67% 57.2% (many diffs)
21 human 148206 ZNF714 zinc finger protein 714 NM_182515.4 67% 56.6% (many diffs)
22 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 66.4% 57.1% (many diffs)
23 human 170959 ZNF431 zinc finger protein 431 NM_001319126.2 66.1% 59.6% (many diffs)
24 human 168374 ZNF92 zinc finger protein 92 NM_001287532.1 66% 56.4% (many diffs)
25 human 388523 ZNF728 zinc finger protein 728 NM_001267716.2 65.8% 56.4% (many diffs)
26 human 170959 ZNF431 zinc finger protein 431 NM_001319127.2 65.7% 59.2% (many diffs)
27 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 65.7% 56.4% (many diffs)
28 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 65.5% 56.1% (many diffs)
29 human 9534 ZNF254 zinc finger protein 254 NM_203282.4 65.1% 57% (many diffs)
30 human 148213 ZNF681 zinc finger protein 681 NM_138286.3 63.9% 54.7% (many diffs)
31 human 7562 ZNF708 zinc finger protein 708 NM_001297560.1 62.9% 52.6% (many diffs)
32 human 7562 ZNF708 zinc finger protein 708 NM_001297561.1 62.9% 52.6% (many diffs)
33 human 7562 ZNF708 zinc finger protein 708 XM_017027202.2 61.1% 51.1% (many diffs)
34 human 7562 ZNF708 zinc finger protein 708 XM_017027203.2 61.1% 51.1% (many diffs)
35 human 7639 ZNF85 zinc finger protein 85 NM_001256173.1 61.1% 51.6% (many diffs)
36 human 168374 ZNF92 zinc finger protein 92 NM_007139.4 61% 51.1% (many diffs)
37 human 148203 ZNF738 zinc finger protein 738 NM_001355237.2 60.3% 51.1% (many diffs)
38 human 163227 ZNF100 zinc finger protein 100 NM_001351672.2 60.2% 60.1% 0_1ins645;521C>T;954C>T
39 human 9534 ZNF254 zinc finger protein 254 NM_001278661.1 60.2% 52.3% (many diffs)
40 human 9534 ZNF254 zinc finger protein 254 NM_001278662.2 60.2% 52.3% (many diffs)
41 human 9534 ZNF254 zinc finger protein 254 NM_001278677.2 60.2% 52.3% (many diffs)
42 human 9534 ZNF254 zinc finger protein 254 XM_011528443.1 60.2% 52.3% (many diffs)
43 human 9534 ZNF254 zinc finger protein 254 XM_011528444.2 60.2% 52.3% (many diffs)
44 human 9534 ZNF254 zinc finger protein 254 XM_017027515.1 60.2% 52.3% (many diffs)
45 human 168374 ZNF92 zinc finger protein 92 NM_001287533.2 60% 50.3% (many diffs)
46 human 168374 ZNF92 zinc finger protein 92 NM_001287534.2 60% 50.3% (many diffs)
47 human 284443 ZNF493 zinc finger protein 493 NM_001076678.3 55.2% 48.3% (many diffs)
48 human 9534 ZNF254 zinc finger protein 254 NM_001278663.2 54.3% 46.9% (many diffs)
49 human 9534 ZNF254 zinc finger protein 254 NM_001278678.1 54.3% 46.9% (many diffs)
50 human 9534 ZNF254 zinc finger protein 254 XM_011528448.3 54.3% 46.9% (many diffs)
51 human 170959 ZNF431 zinc finger protein 431 XR_001753621.1 53% (many diffs)
52 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 51.8% 43% (many diffs)
53 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 51.2% 42.4% (many diffs)
54 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 51.2% 42.4% (many diffs)
55 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 51.2% 42.4% (many diffs)
56 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 51.2% 42.4% (many diffs)
57 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 51.2% 42.4% (many diffs)
58 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 51.2% 42.4% (many diffs)
59 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 51.2% 42.4% (many diffs)
60 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 51.2% 42.4% (many diffs)
61 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 51.2% 42.4% (many diffs)
62 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 51.2% 42.4% (many diffs)
63 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 51.2% 42.4% (many diffs)
64 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 51.2% 42.4% (many diffs)
65 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 51.2% 42.4% (many diffs)
66 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 51.2% 42.4% (many diffs)
67 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 51.2% 42.4% (many diffs)
68 human 148206 ZNF714 zinc finger protein 714 NR_117087.1 50.9% (many diffs)
69 human 148206 ZNF714 zinc finger protein 714 NR_117086.1 50.4% (many diffs)
70 human 51427 ZNF107 zinc finger protein 107 NM_001282359.1 49.5% 41.4% (many diffs)
71 human 51427 ZNF107 zinc finger protein 107 NM_001282360.1 46.3% 38.2% (many diffs)
72 human 51427 ZNF107 zinc finger protein 107 NM_001013746.3 42.6% 34.9% (many diffs)
73 human 51427 ZNF107 zinc finger protein 107 NM_016220.5 42.6% 34.9% (many diffs)
74 human 51427 ZNF107 zinc finger protein 107 XM_017012283.2 42.6% 34.9% (many diffs)
75 human 51427 ZNF107 zinc finger protein 107 XM_017012285.2 42.6% 34.9% (many diffs)
76 human 51427 ZNF107 zinc finger protein 107 XM_017012286.1 42.6% 34.9% (many diffs)
77 human 170959 ZNF431 zinc finger protein 431 XR_001753620.1 28.2% (many diffs)
78 human 7697 ZNF138 zinc finger protein 138 NM_001271649.2 27.2% 21.5% (many diffs)
79 human 148203 ZNF738 zinc finger protein 738 NM_001355240.1 19.1% 16.2% (many diffs)
80 human 148203 ZNF738 zinc finger protein 738 NM_001355241.2 17.9% 15.8% (many diffs)
81 human 170959 ZNF431 zinc finger protein 431 NR_138053.2 16.4% (many diffs)
82 human 170959 ZNF431 zinc finger protein 431 NR_138052.2 16.3% (many diffs)
83 human 284443 ZNF493 zinc finger protein 493 NM_145326.3 16% 13.3% (many diffs)
84 human 7639 ZNF85 zinc finger protein 85 NM_001256172.2 13.7% 11.6% (many diffs)
85 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 12.9% 11.9% (many diffs)
86 human 51427 ZNF107 zinc finger protein 107 XM_024446791.1 12.5% 11.6% (many diffs)
87 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 12.3% 10.8% (many diffs)
88 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 10.1% 7.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1692
ORF length:
1626
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA TGACCCGAGG TATGGAATGT GTCCTCTCAA GGGAGCAAGT GGATGCCCTG
121GGGCTGAGAG GAGTCTTCTG GTGCAGTCTT ATTTTGAAAA GGGGCCATTG ACGTTTAGGG
181ATGTGGCCAT AGAATTCTCT CTGGAGGAGT GGCAATGCCT GGACAGTGCT CAGCAGGGTT
241TGTATAGGAA AGTGATGTTA GAGAACTACA GAAACCTGGT CTTCTTGGCA GGTATTGCTC
301TCACTAAGCC AGACCTGATC ACCTGTCTGG AGCAAGGAAA AGAGCCCTGG AATATAAAGA
361GACATGAGAT GGTAGCCAAA CCCCCAGTTA TATGTTCTCA TTTTCCCCAA GACCTTTGGG
421CAGAGCAGGA CATTAAAGAT TCTTTTCAAG AAGCGATTCT GAAAAAATAT GGAAAATATG
481GACATGACAA TTTACAGTTA CAAAAAGGCT GTAAAAGTGT GGATGAGTGT AAAGTGCACA
541AAGAACATGA TAACAAATTA AACCAGTGTT TGATAACTAC CCAGAGCAAC ATATTTCAAT
601GTGATCCATC TGCAAAAGTC TTTCATACAT TTTCAAATTC AAACAGACAT AAGATAAGAC
661ATACTAGAAA GAAACCTTTC AAATGTAAAA AATGTGAAAA ATCATTTTGC ATGCTTTTAC
721ACCTAACTCA ACATAAAAGA TTTCATATTA CAGAGAATTC CTACCAATGT AAAGATTGTG
781GCAAAGCCTT CAACTGGTTC TCAACCCTTA CTACACACAG GAGAATTCAT ACTGGAGAGA
841AACCCTACAA ATGTGaagaa tgtgggaaag catttaaccg gtcctcacac cttactacac
901ataagataat tcatactgga gagaaaccat acagatgtga agaatgtggg aaagctttta
961accggtcttc acaccttact acacataaaa gaattcatac tggagtgaaa ccctacaaat
1021gtacagaatg tggcaaagct tttaaccggt cctcacacct tactacacac aggataattc
1081atactggaga gaaaccctac aaatgtgaag aatgtggcaa agcctttaac cagtcctcaa
1141cccttactac acataagata actcatgctg gagagaaacc ttacaaatgt gaagaatgtg
1201gcaaagcttt ttaccgattc tcatacctta ttaaacataa gacaagtcat actggagaga
1261aattctacaa atgtgaagaa tgcggcaaag gctttaactg gtcctcagcc ctcactaaac
1321ataagagaat tcatactgga gagaaaccct acaaatgtga agaatgtggc aaagctttta
1381atgagtcctc aaaccttact acccataaga tgattcatac tggagagaaa ccctacaaat
1441gtgacgaatg tggcaaagcc tttaaccggt cctcacaact aactgcacat aagatgattc
1501atactggaga gaaaccctac aaatgtgagg aatgtggcaa agcttttaac cgatcctcaa
1561cccttactaa acataagata actcatactg gagagaaatc ttacaaatgg gaagaatgtg
1621gtaaagactt taaccagtcc ctaagcctta ttaaacaaaa taaTTCATAC TGGAGAGAAA
1681CCCTACAAAT GTGCCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1741caatttgttg caacgaac

Download FASTA (ORF) (Full)

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