Construct: ORF ccsbBroadEn_09784
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF000030.1_s300c1, BRDN0000456673
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ZNF431 (170959)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
---|---|---|---|---|---|---|---|---|
1 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_133473.4 | 99.9% | 99.8% | 593A>G |
2 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_001319124.2 | 99.7% | 99.6% | 223_225delGCA;596A>G |
3 | human | 170959 | ZNF431 | zinc finger protein 431 | XM_011527750.2 | 97% | 96.9% | 95_142del;271_273delGCA;644A>G |
4 | human | 80264 | ZNF430 | zinc finger protein 430 | NM_001172671.2 | 87.6% | 78.2% | (many diffs) |
5 | human | 80264 | ZNF430 | zinc finger protein 430 | NM_025189.4 | 87.4% | 78.1% | (many diffs) |
6 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351669.2 | 82% | 73.2% | (many diffs) |
7 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_173531.4 | 81.8% | 73.1% | (many diffs) |
8 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_001319126.2 | 81.8% | 81.7% | 0_1ins295;22_43del;320A>G |
9 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_001319127.2 | 81.3% | 81.2% | 0_1ins321;272A>G |
10 | human | 7562 | ZNF708 | zinc finger protein 708 | NM_021269.3 | 77.4% | 66% | (many diffs) |
11 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351670.2 | 77.2% | 69.4% | (many diffs) |
12 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027201.1 | 76.6% | 65.5% | (many diffs) |
13 | human | 148206 | ZNF714 | zinc finger protein 714 | NM_182515.4 | 76.4% | 69% | (many diffs) |
14 | human | 646864 | ZNF723 | zinc finger protein 723 | NM_001349726.2 | 75.8% | 64.4% | (many diffs) |
15 | human | 646864 | ZNF723 | zinc finger protein 723 | XM_024451652.1 | 75.8% | 64.4% | (many diffs) |
16 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_152626.4 | 75.6% | 64.8% | (many diffs) |
17 | human | 7639 | ZNF85 | zinc finger protein 85 | NM_003429.5 | 74.5% | 64.5% | (many diffs) |
18 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027204.2 | 74.4% | 64.3% | (many diffs) |
19 | human | 57615 | ZNF492 | zinc finger protein 492 | NM_020855.3 | 73.5% | 61.6% | (many diffs) |
20 | human | 440519 | ZNF724 | zinc finger protein 724 | NM_001355404.2 | 72.4% | 61.7% | (many diffs) |
21 | human | 440519 | ZNF724 | zinc finger protein 724 | NM_001355406.2 | 71.6% | 61.2% | (many diffs) |
22 | human | 730087 | ZNF726 | zinc finger protein 726 | NM_001244038.2 | 71.3% | 60.2% | (many diffs) |
23 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_001287532.1 | 71.2% | 61.1% | (many diffs) |
24 | human | 7639 | ZNF85 | zinc finger protein 85 | NM_001256171.1 | 71.1% | 61.5% | (many diffs) |
25 | human | 388523 | ZNF728 | zinc finger protein 728 | NM_001267716.2 | 70.1% | 58.6% | (many diffs) |
26 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_203282.4 | 70.1% | 59.7% | (many diffs) |
27 | human | 7639 | ZNF85 | zinc finger protein 85 | XM_011528263.2 | 69.5% | 60.2% | (many diffs) |
28 | human | 148213 | ZNF681 | zinc finger protein 681 | NM_138286.3 | 68.8% | 58.1% | (many diffs) |
29 | human | 7562 | ZNF708 | zinc finger protein 708 | NM_001297560.1 | 68.2% | 57.9% | (many diffs) |
30 | human | 7562 | ZNF708 | zinc finger protein 708 | NM_001297561.1 | 68.2% | 57.9% | (many diffs) |
31 | human | 163223 | ZNF676 | zinc finger protein 676 | NM_001001411.3 | 67.2% | 54.8% | (many diffs) |
32 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351671.2 | 66.7% | 60% | (many diffs) |
33 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027202.2 | 66.6% | 56.4% | (many diffs) |
34 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027203.2 | 66.6% | 56.4% | (many diffs) |
35 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_007139.4 | 66% | 56.6% | (many diffs) |
36 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001001415.4 | 66% | 56% | (many diffs) |
37 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346912.2 | 65.8% | 55.6% | (many diffs) |
38 | human | 7639 | ZNF85 | zinc finger protein 85 | NM_001256173.1 | 65.7% | 57.1% | (many diffs) |
39 | human | 7639 | ZNF85 | zinc finger protein 85 | XM_011528264.1 | 65.4% | 56.4% | (many diffs) |
40 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_001287533.2 | 65.2% | 55.9% | (many diffs) |
41 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_001287534.2 | 65.2% | 55.9% | (many diffs) |
42 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278661.1 | 65% | 55.5% | (many diffs) |
43 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278662.2 | 65% | 55.5% | (many diffs) |
44 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278677.2 | 65% | 55.5% | (many diffs) |
45 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_011528443.1 | 65% | 55.5% | (many diffs) |
46 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_011528444.2 | 65% | 55.5% | (many diffs) |
47 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_017027515.1 | 65% | 55.5% | (many diffs) |
48 | human | 170959 | ZNF431 | zinc finger protein 431 | XR_001753621.1 | 64.6% | (many diffs) | |
49 | human | 440519 | ZNF724 | zinc finger protein 724 | NM_001355405.2 | 63.7% | 54.2% | (many diffs) |
50 | human | 440519 | ZNF724 | zinc finger protein 724 | XM_024451520.1 | 63.7% | 54.2% | (many diffs) |
51 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346913.2 | 62.2% | 52.6% | (many diffs) |
52 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346914.2 | 62.2% | 52.6% | (many diffs) |
53 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346915.2 | 62.2% | 52.6% | (many diffs) |
54 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026750.2 | 62.2% | 52.6% | (many diffs) |
55 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026752.1 | 62.2% | 52.6% | (many diffs) |
56 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026753.2 | 62.2% | 52.6% | (many diffs) |
57 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026755.1 | 62.2% | 52.6% | (many diffs) |
58 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278664.1 | 60.9% | 51.8% | (many diffs) |
59 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_017027518.1 | 60.9% | 51.8% | (many diffs) |
60 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_017027519.1 | 60.9% | 51.8% | (many diffs) |
61 | human | 284443 | ZNF493 | zinc finger protein 493 | NM_001076678.3 | 59.5% | 51.5% | (many diffs) |
62 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278663.2 | 59.2% | 50.2% | (many diffs) |
63 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278678.1 | 59.2% | 50.2% | (many diffs) |
64 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_011528448.3 | 59.2% | 50.2% | (many diffs) |
65 | human | 148206 | ZNF714 | zinc finger protein 714 | NR_117087.1 | 58.8% | (many diffs) | |
66 | human | 148206 | ZNF714 | zinc finger protein 714 | NR_117086.1 | 58.4% | (many diffs) | |
67 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346916.2 | 58.4% | 49.2% | (many diffs) |
68 | human | 148203 | ZNF738 | zinc finger protein 738 | NM_001355237.2 | 57.3% | 50.1% | (many diffs) |
69 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256653.1 | 57% | 47.7% | (many diffs) |
70 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_003423.4 | 56.3% | 47.2% | (many diffs) |
71 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256648.2 | 55.8% | 46.9% | (many diffs) |
72 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256649.2 | 55.8% | 46.9% | (many diffs) |
73 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256650.2 | 55.8% | 46.9% | (many diffs) |
74 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_011528257.3 | 55.8% | 46.9% | (many diffs) |
75 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_011528259.3 | 55.8% | 46.9% | (many diffs) |
76 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027207.2 | 55.8% | 46.9% | (many diffs) |
77 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027208.2 | 55.8% | 46.9% | (many diffs) |
78 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027209.2 | 55.8% | 46.9% | (many diffs) |
79 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027210.2 | 55.8% | 46.9% | (many diffs) |
80 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027211.2 | 55.8% | 46.9% | (many diffs) |
81 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027212.2 | 55.8% | 46.9% | (many diffs) |
82 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027213.2 | 55.8% | 46.9% | (many diffs) |
83 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027214.2 | 55.8% | 46.9% | (many diffs) |
84 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027215.2 | 55.8% | 46.9% | (many diffs) |
85 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027216.2 | 55.8% | 46.9% | (many diffs) |
86 | human | 51427 | ZNF107 | zinc finger protein 107 | NM_001282359.1 | 53.1% | 44.7% | (many diffs) |
87 | human | 7652 | ZNF99 | zinc finger protein 99 | NM_001080409.3 | 52.1% | 42.7% | (many diffs) |
88 | human | 51427 | ZNF107 | zinc finger protein 107 | NM_001282360.1 | 50.1% | 42.1% | (many diffs) |
89 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351672.2 | 50.1% | 46.3% | (many diffs) |
90 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256651.2 | 49.6% | 41.4% | (many diffs) |
91 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256654.2 | 49.6% | 41.4% | (many diffs) |
92 | human | 51427 | ZNF107 | zinc finger protein 107 | NM_001013746.3 | 46.4% | 39% | (many diffs) |
93 | human | 51427 | ZNF107 | zinc finger protein 107 | NM_016220.5 | 46.4% | 39% | (many diffs) |
94 | human | 51427 | ZNF107 | zinc finger protein 107 | XM_017012283.2 | 46.4% | 39% | (many diffs) |
95 | human | 51427 | ZNF107 | zinc finger protein 107 | XM_017012285.2 | 46.4% | 39% | (many diffs) |
96 | human | 51427 | ZNF107 | zinc finger protein 107 | XM_017012286.1 | 46.4% | 39% | (many diffs) |
97 | human | 284443 | ZNF493 | zinc finger protein 493 | NM_175910.7 | 46.3% | 41% | (many diffs) |
98 | human | 7757 | ZNF208 | zinc finger protein 208 | NM_007153.3 | 35.5% | 29.3% | (many diffs) |
99 | human | 170959 | ZNF431 | zinc finger protein 431 | XR_001753620.1 | 34.4% | (many diffs) | |
100 | human | 148206 | ZNF714 | zinc finger protein 714 | NR_117088.1 | 20.4% | (many diffs) | |
101 | human | 170959 | ZNF431 | zinc finger protein 431 | NR_138053.2 | 20% | (many diffs) | |
102 | human | 170959 | ZNF431 | zinc finger protein 431 | NR_138052.2 | 19.8% | (many diffs) | |
103 | human | 148203 | ZNF738 | zinc finger protein 738 | NM_001355241.2 | 16.1% | 13.7% | (many diffs) |
104 | human | 730087 | ZNF726 | zinc finger protein 726 | NM_001348689.2 | 11.9% | 10% | (many diffs) |
105 | human | 440519 | ZNF724 | zinc finger protein 724 | XM_024451521.1 | 11.7% | 9.8% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 1797
- ORF length:
- 1728
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG 61 TTGGCACCAT GGACGACTTG AAATATGGAG TGTATCCTCT CAAGGAAGCA AGTGGATGCC 121 CTGGGGCTGA GAGGAATCTT CTAGTTTACT CTTATTTTGA AAAGGAGACA TTGACATTTA 181 GGGATGTGGC CATAGAATTC TCTCTGGAGG AGTGGGAATG CCTGAACCCT GCTCAGCAGA 241 ATTTATATAT GAATGTGATG TTAGAAAACT ACAAAAACCT GGTCTTCTTG GGTGTTGCTG 301 TCTCTAAGCA AGACCCAGTC ACCTGTCTGG AGCAAGAAAA AGAGCCCTGG AATATGAAGA 361 GACATGAGAT GGTGGATGAA CCCCCAGCTA TGTGTTCTTA TTTTACCAAA GACCTTTGGC 421 CAGAGCAAGA CATAAAAGAT TCTTTTCAAC AAGTAATACT GAGAAGATAT GGCAAATGTG 481 AACATGAGAA TTTACAGTTA AGAAAAGGCT CCGCAAGTGT AGATGAGTAT AAGGTGCACA 541 AAGAAGGTTA TAATGAGCTA AACCAGTGTT TGACAACTAC CCAGAGCAAA ATATTTCCAT 601 GTGATAAATA TGTGAAAGTC TTTCATAAAT TTTTAAATGC AAATAGACAT AAGACAAGAC 661 GTACTGGAAA GAAACCTTTC AAATGTAAAA AATGTGGCAA ATCATTTTGC ATGCTTTTAC 721 ACCTAAGTCA ACATAAAAGA ATTCATATTA GAGAGAATTC TTACCAATGT GAAGAATGTG 781 GCAAAGCTTT TAAATGGTTC TCAACCCTTA CTAGACACAA GAGAATTCAT ACTGGAGAGA 841 AACCCTTCAA ATGTGAAGAA TGTGGCAAAG CTTTTAAGCA GTCCTCAACC CTTACTACAC 901 ATAAGATAAT TCATACTGGG GAGAAACCAT ATAGATGTGA AGAATGTGGC AAAGCCTTCA 961 ACCGGTCCTC ACACCTTACT ACACATAAGA TAATTCATAC TGGAGAGAAG CCCTACAAAT 1021 GTGAAGAATG TGGCAAAGCT TTTAACCAGT CTTCAACCCT TAGTACACAT AAGTTCATTC 1081 ATGCTGGAGA GAAACCCTAC AAATGTGAGG AATGTGACAA AGCTTTTAAT CGATTCTCAT 1141 ACCTTACTAA ACATAAGATA ATTCATACTG GAGAAAAATC TTACAAATGT GAAGAATGTG 1201 GCAAAGGCTT TAATTGGTCC TCAACCCTTA CTAAACATAA AAGAATTCAT ACTGGAGAGA 1261 AACCCTACAA ATGTGAAGTG TGTGGCAAAG CCTTTAATGA GTCCTCAAAC CTTACTACAC 1321 ATAAGATGAT TCATACTGGA GAGAAACCCT ACAAATGTGA AGAATGTGGC AAAGCTTTTA 1381 ACCGGTCCCC ACAACTTACT GCACATAAGA TAATTCATAC TGGAGAGAAA CCTTACAAAT 1441 GTGAAGAATG TGGCAAAGCT TTTAGCCAGT CATCAATCCT TACTACACAT AAGAGAATTC 1501 ACACTGGAGA GAAACCCTAC AAATGTGAAG AATGTGGCAA AGCTTTTAAC CGATCCTCAA 1561 ATCTTACTAA ACATAAGATA ATTCATACAG GAGAGAAATC TTACAAATGT GAAGAATGTG 1621 GTAAAGCCTT TAACCAATCC TCAACTCTTA CTAAACATAG GAAAATTCAT ACTAGACAGA 1681 AACCCTACAA CTGTGAAGAA TGTGACAATA CATTTAACCA GTCCTCAAAC CTTATTAAAC 1741 AAAATAATTC ATACTGGAGA GAAACTCTAC AAATGTCAAG AATGTGGGAA AGCCTTTTGC 1801 CAACTTTCTT GTACAAAGTT GGcattataa gaaagcattg cttatcaatt tgttgcaacg 1861 aac