Construct: ORF ccsbBroad304_11384

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016425.1_s304c1, BRDN0000408026
Derived from:
ccsbBroadEn_11384
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF254 (9534)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11384
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9534 ZNF254 zinc finger protein 254 NM_001278665.2 100% 100%
2 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 79.4% 75.8% (many diffs)
3 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 78% 73.6% (many diffs)
4 human 284443 ZNF493 zinc finger protein 493 NM_145326.3 76.6% 69.5% (many diffs)
5 human 730087 ZNF726 zinc finger protein 726 NM_001348688.2 74.8% 70.7% (many diffs)
6 human 51427 ZNF107 zinc finger protein 107 XM_024446791.1 72.8% 68.1% (many diffs)
7 human 7639 ZNF85 zinc finger protein 85 NM_001256172.2 71.8% 64.5% (many diffs)
8 human 7644 ZNF91 zinc finger protein 91 XM_024451693.1 69.9% 66.1% (many diffs)
9 human 340252 ZNF680 zinc finger protein 680 NM_001130022.1 65.6% 60.1% (many diffs)
10 human 730087 ZNF726 zinc finger protein 726 NM_001348687.2 63.2% 61% (many diffs)
11 human 7757 ZNF208 zinc finger protein 208 NM_001329974.1 61.1% 53.7% (many diffs)
12 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 60.8% 40.6% (many diffs)
13 human 340252 ZNF680 zinc finger protein 680 XM_017012129.1 59.2% 56.1% (many diffs)
14 human 7757 ZNF208 zinc finger protein 208 NM_001329971.1 48.8% 43.6% (many diffs)
15 human 7757 ZNF208 zinc finger protein 208 NM_001329973.1 48.5% 43.3% (many diffs)
16 human 7697 ZNF138 zinc finger protein 138 NM_001367574.1 42.9% 37.3% (many diffs)
17 human 7697 ZNF138 zinc finger protein 138 NM_001367575.1 42.9% 37.3% (many diffs)
18 human 7757 ZNF208 zinc finger protein 208 NM_001329972.1 42.4% 37.2% (many diffs)
19 human 148206 ZNF714 zinc finger protein 714 NR_117088.1 36.3% (many diffs)
20 human 7757 ZNF208 zinc finger protein 208 NR_138252.1 30.4% (many diffs)
21 human 7697 ZNF138 zinc finger protein 138 NM_001271639.2 19.9% 17.1% (many diffs)
22 human 168417 ZNF679 zinc finger protein 679 NM_153363.3 18.9% 17.7% (many diffs)
23 human 168417 ZNF679 zinc finger protein 679 XM_017011797.1 18.9% 17.7% (many diffs)
24 human 7639 ZNF85 zinc finger protein 85 NR_045830.2 15.8% (many diffs)
25 human 100129543 ZNF730 zinc finger protein 730 XM_017026115.2 15.1% 13.2% (many diffs)
26 human 340252 ZNF680 zinc finger protein 680 NM_178558.5 15.1% 13.5% (many diffs)
27 human 148198 ZNF98 zinc finger protein 98 NM_001098626.2 14.1% 12.9% (many diffs)
28 human 10793 ZNF273 zinc finger protein 273 NM_021148.2 14.1% 13% (many diffs)
29 human 100129543 ZNF730 zinc finger protein 730 NM_001277403.2 13.8% 12.3% (many diffs)
30 human 9534 ZNF254 zinc finger protein 254 NM_203282.4 13.5% 12.8% (many diffs)
31 human 170959 ZNF431 zinc finger protein 431 XM_011527750.2 13.1% 11% (many diffs)
32 human 171392 ZNF675 zinc finger protein 675 NM_138330.3 12.6% 10.9% (many diffs)
33 human 113835 ZNF257 zinc finger protein 257 NM_033468.4 12.6% 11% (many diffs)
34 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 12.3% 11.3% (many diffs)
35 human 730087 ZNF726 zinc finger protein 726 NM_001244038.2 12.2% 11% (many diffs)
36 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 12.1% 10.2% (many diffs)
37 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 11.9% 10.7% (many diffs)
38 human 7562 ZNF708 zinc finger protein 708 XM_017027204.2 11.8% 10.9% (many diffs)
39 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 11.6% 10.6% (many diffs)
40 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 11.6% 10.4% (many diffs)
41 human 388523 ZNF728 zinc finger protein 728 NM_001267716.2 11.4% 10.1% (many diffs)
42 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 11.3% 10.4% (many diffs)
43 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 11% 9.8% (many diffs)
44 human 148213 ZNF681 zinc finger protein 681 NM_138286.3 10.9% 9.9% (many diffs)
45 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 10.8% 9.8% (many diffs)
46 human 353088 ZNF429 zinc finger protein 429 NM_001001415.4 10.4% 9.6% (many diffs)
47 human 284443 ZNF493 zinc finger protein 493 NM_001076678.3 10.2% 8.9% (many diffs)
48 human 353088 ZNF429 zinc finger protein 429 NM_001346912.2 10.1% 9.2% (many diffs)
49 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 9.7% 8.6% (many diffs)
50 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 8.9% 7.9% (many diffs)
51 human 148206 ZNF714 zinc finger protein 714 NR_117087.1 8.9% (many diffs)
52 human 170959 ZNF431 zinc finger protein 431 XR_001753621.1 8.7% (many diffs)
53 human 148206 ZNF714 zinc finger protein 714 NR_117086.1 8.7% (many diffs)
54 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 8.2% 7.3% (many diffs)
55 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 8.2% 7.3% (many diffs)
56 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 8.2% 7.3% (many diffs)
57 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 8.2% 7.3% (many diffs)
58 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 8.2% 7.3% (many diffs)
59 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 8.2% 7.3% (many diffs)
60 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 8.2% 7.3% (many diffs)
61 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 8.2% 7.3% (many diffs)
62 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 8.2% 7.3% (many diffs)
63 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 8.2% 7.3% (many diffs)
64 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 8.2% 7.3% (many diffs)
65 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 8.2% 7.3% (many diffs)
66 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 8.2% 7.3% (many diffs)
67 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 8.2% 7.3% (many diffs)
68 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 8.2% 7.3% (many diffs)
69 human 7697 ZNF138 zinc finger protein 138 NR_073391.2 8.2% (many diffs)
70 human 7652 ZNF99 zinc finger protein 99 NM_001080409.3 8.2% 7.3% (many diffs)
71 human 340252 ZNF680 zinc finger protein 680 XR_428175.4 8.1% (many diffs)
72 human 113835 ZNF257 zinc finger protein 257 NM_001316996.2 7.8% 6.8% (many diffs)
73 human 340252 ZNF680 zinc finger protein 680 XR_001744687.1 7.5% (many diffs)
74 human 340252 ZNF680 zinc finger protein 680 XR_002956428.1 7.4% (many diffs)
75 human 9534 ZNF254 zinc finger protein 254 NM_001278661.1 7.3% 6.6% (many diffs)
76 human 9534 ZNF254 zinc finger protein 254 NM_001278662.2 7.3% 6.6% (many diffs)
77 human 9534 ZNF254 zinc finger protein 254 NM_001278677.2 7.3% 6.6% (many diffs)
78 human 9534 ZNF254 zinc finger protein 254 XM_011528443.1 7.3% 6.6% (many diffs)
79 human 9534 ZNF254 zinc finger protein 254 XM_011528444.2 7.3% 6.6% (many diffs)
80 human 9534 ZNF254 zinc finger protein 254 XM_017027515.1 7.3% 6.6% (many diffs)
81 human 7644 ZNF91 zinc finger protein 91 NM_003430.4 7.1% 6.6% (many diffs)
82 human 7644 ZNF91 zinc finger protein 91 NM_001300951.2 6.9% 4.5% (many diffs)
83 human 100287226 ZNF729 zinc finger protein 729 NM_001242680.2 6.4% 5.5% (many diffs)
84 human 388524 RPSAP58 ribosomal protein SA pseudo... NR_149350.2 5.8% (many diffs)
85 human 7757 ZNF208 zinc finger protein 208 NM_007153.3 5.6% 5% (many diffs)
86 human 10793 ZNF273 zinc finger protein 273 NR_003099.1 5.5% (many diffs)
87 human 7644 ZNF91 zinc finger protein 91 XR_001753756.2 5% (many diffs)
88 human 170959 ZNF431 zinc finger protein 431 XR_001753620.1 4.7% (many diffs)
89 human 7644 ZNF91 zinc finger protein 91 XR_001753755.2 3.7% (many diffs)
90 human 7644 ZNF91 zinc finger protein 91 XR_001753754.2 2.9% (many diffs)
91 human 170959 ZNF431 zinc finger protein 431 NR_138053.2 2.8% (many diffs)
92 human 170959 ZNF431 zinc finger protein 431 NR_138052.2 2.7% (many diffs)
93 human 7644 ZNF91 zinc finger protein 91 XR_002958354.1 2.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
339
ORF length:
273
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc aggaccccct agaagcctag aaatgggact gttgacattt agggatgtgg
121ccatagaatt ctctctggag gagtggcaac acctggacat tgcacagcag aatttatata
181gaaatgtgat gttagagaac tacagaaacc tggccttcct gggtattgct gtctctaagc
241cagacctgat cacctgtctg gaacaaggga aagagccctg gaatatgaag cgacatgaga
301tggtggatga acccccagga ttggattttt cattactgtg cccaactttc ttgtacaaag
361tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
421gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)

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