Construct: ORF ccsbBroadEn_15167
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF000303.1_s300c1, BRDN0000398265
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- Early stop codon detected
Originally Annotated References:
- Gene:
- ZNF430 (80264)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
---|---|---|---|---|---|---|---|---|
1 | human | 80264 | ZNF430 | zinc finger protein 430 | NM_001172671.2 | 99.7% | 50.7% | 866G>A;871G>T;1675_1676delAGinsGA |
2 | human | 80264 | ZNF430 | zinc finger protein 430 | NM_025189.4 | 99.5% | 50.7% | (many diffs) |
3 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_133473.4 | 87.5% | 40.2% | (many diffs) |
4 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_001319124.2 | 87.4% | 40.2% | (many diffs) |
5 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351669.2 | 85.8% | 41.5% | (many diffs) |
6 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_173531.4 | 85.7% | 41.5% | (many diffs) |
7 | human | 170959 | ZNF431 | zinc finger protein 431 | XM_011527750.2 | 85% | 39.1% | (many diffs) |
8 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351670.2 | 80.7% | 36.7% | (many diffs) |
9 | human | 148198 | ZNF98 | zinc finger protein 98 | NM_001098626.2 | 78.9% | 33.6% | (many diffs) |
10 | human | 113835 | ZNF257 | zinc finger protein 257 | NM_033468.4 | 77.2% | 32.4% | (many diffs) |
11 | human | 646864 | ZNF723 | zinc finger protein 723 | NM_001349726.2 | 77.2% | 36.3% | (many diffs) |
12 | human | 646864 | ZNF723 | zinc finger protein 723 | XM_024451652.1 | 77.2% | 36.3% | (many diffs) |
13 | human | 7562 | ZNF708 | zinc finger protein 708 | NM_021269.3 | 76.1% | 31.7% | (many diffs) |
14 | human | 340252 | ZNF680 | zinc finger protein 680 | NM_178558.5 | 75.8% | 37.6% | (many diffs) |
15 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_152626.4 | 75.4% | 32.5% | (many diffs) |
16 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027201.1 | 75.2% | 30.8% | (many diffs) |
17 | human | 7639 | ZNF85 | zinc finger protein 85 | NM_003429.5 | 74.1% | 31.7% | (many diffs) |
18 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027204.2 | 73.2% | 30.4% | (many diffs) |
19 | human | 57615 | ZNF492 | zinc finger protein 492 | NM_020855.3 | 73.1% | 28.1% | (many diffs) |
20 | human | 113835 | ZNF257 | zinc finger protein 257 | NM_001316996.2 | 72.7% | 28.2% | (many diffs) |
21 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_001319126.2 | 71.4% | 26% | (many diffs) |
22 | human | 170959 | ZNF431 | zinc finger protein 431 | NM_001319127.2 | 71% | 25.6% | (many diffs) |
23 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_001287532.1 | 70.8% | 28.2% | (many diffs) |
24 | human | 7639 | ZNF85 | zinc finger protein 85 | NM_001256171.1 | 70.7% | 30.4% | (many diffs) |
25 | human | 440519 | ZNF724 | zinc finger protein 724 | NM_001355404.2 | 70.6% | 28.7% | (many diffs) |
26 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_006715959.2 | 69.9% | 31.7% | (many diffs) |
27 | human | 388523 | ZNF728 | zinc finger protein 728 | NM_001267716.2 | 69.8% | 28.7% | (many diffs) |
28 | human | 440519 | ZNF724 | zinc finger protein 724 | NM_001355406.2 | 69.8% | 27.9% | (many diffs) |
29 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351671.2 | 69.7% | 26.6% | (many diffs) |
30 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_203282.4 | 69.3% | 29.6% | (many diffs) |
31 | human | 7639 | ZNF85 | zinc finger protein 85 | XM_011528263.2 | 69.1% | 29.6% | (many diffs) |
32 | human | 148213 | ZNF681 | zinc finger protein 681 | NM_138286.3 | 68.5% | 28.1% | (many diffs) |
33 | human | 7562 | ZNF708 | zinc finger protein 708 | NM_001297560.1 | 66.6% | 22% | (many diffs) |
34 | human | 7562 | ZNF708 | zinc finger protein 708 | NM_001297561.1 | 66.6% | 22% | (many diffs) |
35 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026748.2 | 66.5% | 28.3% | (many diffs) |
36 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026749.1 | 66.5% | 28.3% | (many diffs) |
37 | human | 148206 | ZNF714 | zinc finger protein 714 | NM_182515.4 | 66.3% | 27.8% | (many diffs) |
38 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_007139.4 | 65.4% | 22.6% | (many diffs) |
39 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001001415.4 | 65.2% | 27.6% | (many diffs) |
40 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027202.2 | 65% | 20.8% | (many diffs) |
41 | human | 7562 | ZNF708 | zinc finger protein 708 | XM_017027203.2 | 65% | 20.8% | (many diffs) |
42 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346912.2 | 65% | 27% | (many diffs) |
43 | human | 7639 | ZNF85 | zinc finger protein 85 | NM_001256173.1 | 64.8% | 22.8% | (many diffs) |
44 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_001287533.2 | 64.4% | 21.8% | (many diffs) |
45 | human | 168374 | ZNF92 | zinc finger protein 92 | NM_001287534.2 | 64.4% | 21.8% | (many diffs) |
46 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278661.1 | 64.2% | 25.1% | (many diffs) |
47 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278662.2 | 64.2% | 25.1% | (many diffs) |
48 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278677.2 | 64.2% | 25.1% | (many diffs) |
49 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_011528443.1 | 64.2% | 25.1% | (many diffs) |
50 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_011528444.2 | 64.2% | 25.1% | (many diffs) |
51 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_017027515.1 | 64.2% | 25.1% | (many diffs) |
52 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_024446742.1 | 64.2% | 25.9% | (many diffs) |
53 | human | 440519 | ZNF724 | zinc finger protein 724 | NM_001355405.2 | 61.6% | 19.7% | (many diffs) |
54 | human | 440519 | ZNF724 | zinc finger protein 724 | XM_024451520.1 | 61.6% | 19.7% | (many diffs) |
55 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346913.2 | 61.3% | 23.6% | (many diffs) |
56 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346914.2 | 61.3% | 23.6% | (many diffs) |
57 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346915.2 | 61.3% | 23.6% | (many diffs) |
58 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026750.2 | 61.3% | 23.6% | (many diffs) |
59 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026752.1 | 61.3% | 23.6% | (many diffs) |
60 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026753.2 | 61.3% | 23.6% | (many diffs) |
61 | human | 353088 | ZNF429 | zinc finger protein 429 | XM_017026755.1 | 61.3% | 23.6% | (many diffs) |
62 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278664.1 | 59.8% | 20.5% | (many diffs) |
63 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_017027518.1 | 59.8% | 20.5% | (many diffs) |
64 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_017027519.1 | 59.8% | 20.5% | (many diffs) |
65 | human | 284443 | ZNF493 | zinc finger protein 493 | NM_001076678.3 | 59.1% | 26.2% | (many diffs) |
66 | human | 148203 | ZNF738 | zinc finger protein 738 | NM_001355237.2 | 58.6% | 60.8% | (many diffs) |
67 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278663.2 | 58.3% | 19.2% | (many diffs) |
68 | human | 9534 | ZNF254 | zinc finger protein 254 | NM_001278678.1 | 58.3% | 19.2% | (many diffs) |
69 | human | 9534 | ZNF254 | zinc finger protein 254 | XM_011528448.3 | 58.3% | 19.2% | (many diffs) |
70 | human | 353088 | ZNF429 | zinc finger protein 429 | NM_001346916.2 | 57.2% | 19.7% | (many diffs) |
71 | human | 170959 | ZNF431 | zinc finger protein 431 | XR_001753621.1 | 56.6% | (many diffs) | |
72 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256653.1 | 55.6% | 21.7% | (many diffs) |
73 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_003423.4 | 54.8% | 21.3% | (many diffs) |
74 | human | 148206 | ZNF714 | zinc finger protein 714 | NR_117087.1 | 54.6% | (many diffs) | |
75 | human | 148206 | ZNF714 | zinc finger protein 714 | NR_117086.1 | 54.3% | (many diffs) | |
76 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256648.2 | 54.2% | 20.7% | (many diffs) |
77 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256649.2 | 54.2% | 20.7% | (many diffs) |
78 | human | 7594 | ZNF43 | zinc finger protein 43 | NM_001256650.2 | 54.2% | 20.7% | (many diffs) |
79 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_011528257.3 | 54.2% | 20.7% | (many diffs) |
80 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_011528259.3 | 54.2% | 20.7% | (many diffs) |
81 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027207.2 | 54.2% | 20.7% | (many diffs) |
82 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027208.2 | 54.2% | 20.7% | (many diffs) |
83 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027209.2 | 54.2% | 20.7% | (many diffs) |
84 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027210.2 | 54.2% | 20.7% | (many diffs) |
85 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027211.2 | 54.2% | 20.7% | (many diffs) |
86 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027212.2 | 54.2% | 20.7% | (many diffs) |
87 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027213.2 | 54.2% | 20.7% | (many diffs) |
88 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027214.2 | 54.2% | 20.7% | (many diffs) |
89 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027215.2 | 54.2% | 20.7% | (many diffs) |
90 | human | 7594 | ZNF43 | zinc finger protein 43 | XM_017027216.2 | 54.2% | 20.7% | (many diffs) |
91 | human | 163227 | ZNF100 | zinc finger protein 100 | NM_001351672.2 | 52.8% | 26% | (many diffs) |
92 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_017012126.1 | 47.5% | 18.4% | (many diffs) |
93 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_017012127.1 | 47.5% | 18.4% | (many diffs) |
94 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_017012128.1 | 47.5% | 18.4% | (many diffs) |
95 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_024446743.1 | 47.5% | 18.4% | (many diffs) |
96 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_024446744.1 | 47.5% | 18.4% | (many diffs) |
97 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_024446745.1 | 47.5% | 18.4% | (many diffs) |
98 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_024446746.1 | 47.5% | 18.4% | (many diffs) |
99 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_024446747.1 | 47.5% | 18.4% | (many diffs) |
100 | human | 340252 | ZNF680 | zinc finger protein 680 | XM_024446748.1 | 47.5% | 18.4% | (many diffs) |
101 | human | 284443 | ZNF493 | zinc finger protein 493 | NM_175910.7 | 45.1% | 13.4% | (many diffs) |
102 | human | 7757 | ZNF208 | zinc finger protein 208 | NM_007153.3 | 35.8% | 14.2% | (many diffs) |
103 | human | 170959 | ZNF431 | zinc finger protein 431 | XR_001753620.1 | 30.1% | (many diffs) | |
104 | human | 105372319 | LOC105372319 | zinc finger protein 430-like | XM_017027571.1 | 27.8% | 23.2% | (many diffs) |
105 | human | 148203 | ZNF738 | zinc finger protein 738 | NM_001355240.1 | 17.9% | 31% | (many diffs) |
106 | human | 170959 | ZNF431 | zinc finger protein 431 | NR_138053.2 | 17.5% | (many diffs) | |
107 | human | 170959 | ZNF431 | zinc finger protein 431 | NR_138052.2 | 17.3% | (many diffs) | |
108 | human | 148203 | ZNF738 | zinc finger protein 738 | NM_001355241.2 | 16.9% | 30% | (many diffs) |
109 | human | 7639 | ZNF85 | zinc finger protein 85 | NM_001256172.2 | 13.1% | 22.6% | (many diffs) |
110 | human | 440519 | ZNF724 | zinc finger protein 724 | XM_024451521.1 | 12.1% | 22.7% | (many diffs) |
111 | human | 730087 | ZNF726 | zinc finger protein 726 | NM_001348689.2 | 11.8% | 21.7% | (many diffs) |
112 | human | 51427 | ZNF107 | zinc finger protein 107 | XM_024446791.1 | 11.8% | 21.7% | (many diffs) |
113 | human | 7697 | ZNF138 | zinc finger protein 138 | NM_001271637.2 | 9.7% | 13.8% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 939
- ORF length:
- 870
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG 61 TTGGCACCAT GGAGAACCTG AAGTCTGGAG TGTATCCTCT CAAGGAAGCA AGTGGATGCC 121 CTGGGGCTGA CAGGAATCTT CTGGTGTACT CTTTTTATGA AAAGGGGCCA TTGACATTTA 181 GGGATGTGGC CATAGAATTT TCTCTGGAGG AGTGGCAATG CCTGGACACT GCTCAGCAGG 241 ATTTGTATAG AAAAGTGATG TTAGAGAACT ACAGAAACCT GGTCTTCTTG GGTATTGCTG 301 TTTCTAAGCC AGACCTGATC ACCTGTCTAG AGCAAGGAAA AGAGCCCTGG AATATGAAGA 361 GACATGCGAT GGTAGATCAA CCCCCAGTTA CATATTCTCA TTTTGCCCAA GACCTTTGGC 421 CAGAGCAGGG CATAAAAGAT TCTTTCCAAG AAGTCATATT GAGAAGATAT GGAAAATGTG 481 GACATGAAGA TTTACAGTTA AGAACAGGCT GTAAAAGTGT GGATGAGTGT AATCTGCACA 541 AAGAATGTTA TGATGAACTA AACCAGTGTT TGACAACTAC CCAGAGTGAA ATATTTCAAT 601 ATGATAAATA TGTGAATGTC TTTTATAAAT TTTCAAATCC AAATATACAA AAGATAAGAC 661 ATACTGGAAA GAAGCCTTTC AAATGTAAAA AATGTGACAA ATCGTTTTGC ATGCTTTTAC 721 ACCTAACTCA ACATAAAAGA ATTCATATTA GGGAAAATTC TTACCAATGT GAAGAATGTG 781 GTAAAGTCTT TAACTGGTTC TCAACCCTTA CTAGACACAG AAGAATTCAT ACTGGAGAGA 841 AACCCTACAA ATGTGAACAA TGTGGCAAAG CTTTTAAGCA GTCCTCAACC CTTACTACAC 901 ATAAGATAAT TCATACTGGA GAGAAACCCT ACAAATGTTa agaatgtggc aaaaccttta 961 accggtcctc acaccttact acacataaaa gaattcatac tggagagaaa ccctacagat 1021 gtgaagaatg tggcagagct tttaaccggt cctcacacct tactacacat aagattattc 1081 atactggaga gaaaccctac aaatgtgaag aatgtggcaa agcttttaac caatcctcaa 1141 cccttactac acataagata attcatgctg gagagaaacc ttacaaatgt gaagaatgtg 1201 gcaaagcttt ttaccgattc tcatacctta ctaaacataa gataattcat actggagaga 1261 aattctacaa atgtgaagaa tgtggcaaag gctttaattg gtcctcgacc cttactaaac 1321 ataaaagaat tcatactgga gagaaaccct acaaatgtga acaatgtggc aaagctttta 1381 atgagtcctc aaaccttact gcacataaga taattcatac tggagagaaa ccctacaaat 1441 gtgaagaatg tggcaaagcc tttaaccggt ccccaaaact tactgcacat aaggtaattc 1501 attctggaga gaaaccctac aaatgtgaag aatgtggcaa agcttttaac caattctcaa 1561 accttactaa acataagata actcatattg gagatacatc ttacaaatac ctagaatgtg 1621 ataaagcctt tagccagtct tcaactctta ctaaacataa ggtaattcat actggagaga 1681 aaccctacaa ctgtgaagaa tacggcaaag ctttcaacca gtcctcaaac cttattgaac 1741 aAGATAATTC ATACTGGAGA GAAACCCTAC AAATGTTGCC AACTTTCTTG TACAAAGTtg 1801 gcattataag aaagcattgc ttatcaattt gttgcaacga ac