Construct: ORF TRCN0000470492

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017724.1_s317c1
Derived from:
ccsbBroadEn_15729
DNA Barcode:
GCCGACTTGCTCCATGATGCAGCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF273 (10793)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470492
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 440519 ZNF724 zinc finger protein 724 XM_024451521.1 88.8% 83.9% (many diffs)
2 human 51427 ZNF107 zinc finger protein 107 XM_024446791.1 85.1% 77.7% (many diffs)
3 human 730087 ZNF726 zinc finger protein 726 NM_001348689.2 85.1% 76.5% (many diffs)
4 human 7639 ZNF85 zinc finger protein 85 NM_001256172.2 82.3% 74.7% (many diffs)
5 human 730087 ZNF726 zinc finger protein 726 NM_001348688.2 82% 75.2% (many diffs)
6 human 9534 ZNF254 zinc finger protein 254 NM_001278665.2 77.5% 71.7% (many diffs)
7 human 199777 ZNF626 zinc finger protein 626 NM_145297.3 76.4% 62.5% (many diffs)
8 human 7697 ZNF138 zinc finger protein 138 NM_001367577.1 73.2% 67.8% (many diffs)
9 human 7697 ZNF138 zinc finger protein 138 NM_001271637.2 69.5% 46.5% (many diffs)
10 human 284443 ZNF493 zinc finger protein 493 NM_145326.3 65.7% 62.1% (many diffs)
11 human 7757 ZNF208 zinc finger protein 208 NM_001329974.1 65.2% 54.4% (many diffs)
12 human 730087 ZNF726 zinc finger protein 726 NM_001348687.2 63.5% 58.1% (many diffs)
13 human 148203 ZNF738 zinc finger protein 738 NM_001355241.2 60% 55.3% (many diffs)
14 human 148203 ZNF738 zinc finger protein 738 NM_001355240.1 59.9% 52.1% (many diffs)
15 human 7644 ZNF91 zinc finger protein 91 XM_024451693.1 59% 53.7% (many diffs)
16 human 340252 ZNF680 zinc finger protein 680 NM_001130022.1 58% 53.6% (many diffs)
17 human 340252 ZNF680 zinc finger protein 680 XM_017012129.1 57.1% 50.7% (many diffs)
18 human 7757 ZNF208 zinc finger protein 208 NM_001329971.1 52% 41.9% (many diffs)
19 human 7757 ZNF208 zinc finger protein 208 NM_001329973.1 51.6% 41.6% (many diffs)
20 human 148203 ZNF738 zinc finger protein 738 NM_001355239.2 49.1% 45.6% (many diffs)
21 human 7697 ZNF138 zinc finger protein 138 NM_001160183.3 49% 44.8% (many diffs)
22 human 7757 ZNF208 zinc finger protein 208 NM_001329972.1 43.2% 37.4% (many diffs)
23 human 7757 ZNF208 zinc finger protein 208 NR_138252.1 25.1% (many diffs)
24 human 7697 ZNF138 zinc finger protein 138 NM_001271639.2 19.9% 17.9% (many diffs)
25 human 148203 ZNF738 zinc finger protein 738 NM_001355237.2 18.7% 16.8% (many diffs)
26 human 102724427 LOC102724427 uncharacterized LOC102724427 XR_936398.2 17.3% (many diffs)
27 human 90649 ZNF486 zinc finger protein 486 NM_052852.4 15.2% 12.6% (many diffs)
28 human 100129543 ZNF730 zinc finger protein 730 NM_001277403.2 14.3% 13.7% (many diffs)
29 human 646864 ZNF723 zinc finger protein 723 NM_001349726.2 14% 12.9% (many diffs)
30 human 646864 ZNF723 zinc finger protein 723 XM_024451652.1 14% 12.9% (many diffs)
31 human 7639 ZNF85 zinc finger protein 85 NR_045830.2 14% (many diffs)
32 human 100129543 ZNF730 zinc finger protein 730 XM_017026115.2 14% 13.2% (many diffs)
33 human 56242 ZNF253 zinc finger protein 253 NM_021047.3 14% 12.2% (many diffs)
34 human 100129543 ZNF730 zinc finger protein 730 XM_017026114.1 14% 13.2% (many diffs)
35 human 10793 ZNF273 zinc finger protein 273 NM_021148.2 13.9% 13.1% (many diffs)
36 human 340252 ZNF680 zinc finger protein 680 NM_178558.5 13.7% 12.1% (many diffs)
37 human 163227 ZNF100 zinc finger protein 100 NM_001351669.2 13.3% 11.5% (many diffs)
38 human 163227 ZNF100 zinc finger protein 100 NM_173531.4 13.3% 11.5% (many diffs)
39 human 113835 ZNF257 zinc finger protein 257 NM_033468.4 13.3% 12% (many diffs)
40 human 199777 ZNF626 zinc finger protein 626 NM_001076675.3 13.3% 11.2% (many diffs)
41 human 646864 ZNF723 zinc finger protein 723 XM_024451653.1 13.2% 12.1% (many diffs)
42 human 100129842 ZNF737 zinc finger protein 737 NM_001159293.2 13% 11.4% (many diffs)
43 human 80264 ZNF430 zinc finger protein 430 NM_001172671.2 12.8% 11.9% (many diffs)
44 human 80264 ZNF430 zinc finger protein 430 NM_025189.4 12.8% 11.9% (many diffs)
45 human 7562 ZNF708 zinc finger protein 708 NM_021269.3 12.7% 11.8% (many diffs)
46 human 100129842 ZNF737 zinc finger protein 737 XM_006722597.4 12.7% 11.1% (many diffs)
47 human 100129842 ZNF737 zinc finger protein 737 XM_011527599.3 12.7% 11.1% (many diffs)
48 human 100129842 ZNF737 zinc finger protein 737 XM_005259697.4 12.7% 11.1% (many diffs)
49 human 100129842 ZNF737 zinc finger protein 737 XM_011527598.3 12.7% 11.1% (many diffs)
50 human 148198 ZNF98 zinc finger protein 98 NM_001098626.2 12.6% 11.3% (many diffs)
51 human 7639 ZNF85 zinc finger protein 85 NM_003429.5 12.3% 10.8% (many diffs)
52 human 171392 ZNF675 zinc finger protein 675 NM_138330.3 12.3% 10.6% (many diffs)
53 human 168374 ZNF92 zinc finger protein 92 NM_152626.4 12.2% 10.8% (many diffs)
54 human 7562 ZNF708 zinc finger protein 708 XM_017027204.2 12.2% 11.3% (many diffs)
55 human 440519 ZNF724 zinc finger protein 724 NM_001355404.2 11.8% 10.9% (many diffs)
56 human 7643 ZNF90 zinc finger protein 90 NM_007138.2 11.8% 9.9% (many diffs)
57 human 730087 ZNF726 zinc finger protein 726 NM_001244038.2 11.7% 10.2% (many diffs)
58 human 388523 ZNF728 zinc finger protein 728 NM_001267716.2 11.7% 9.9% (many diffs)
59 human 7562 ZNF708 zinc finger protein 708 XM_017027201.1 11.7% 10.7% (many diffs)
60 human 7639 ZNF85 zinc finger protein 85 NM_001256171.1 11.7% 10.4% (many diffs)
61 human 81931 ZNF93 zinc finger protein 93 NM_031218.4 11.3% 9.6% (many diffs)
62 human 7639 ZNF85 zinc finger protein 85 XM_011528263.2 11.2% 10.3% (many diffs)
63 human 148213 ZNF681 zinc finger protein 681 NM_138286.3 11.1% 9.7% (many diffs)
64 human 9534 ZNF254 zinc finger protein 254 NM_203282.4 11% 10% (many diffs)
65 human 440519 ZNF724 zinc finger protein 724 NM_001355406.2 10.9% 10% (many diffs)
66 human 353088 ZNF429 zinc finger protein 429 NM_001001415.4 10.4% 9.7% (many diffs)
67 human 353088 ZNF429 zinc finger protein 429 XM_017026748.2 10.2% 9.3% (many diffs)
68 human 353088 ZNF429 zinc finger protein 429 XM_017026749.1 10.2% 9.3% (many diffs)
69 human 353088 ZNF429 zinc finger protein 429 NM_001346912.2 9.9% 9.1% (many diffs)
70 human 100129842 ZNF737 zinc finger protein 737 XR_001753570.2 9.7% (many diffs)
71 human 284443 ZNF493 zinc finger protein 493 NM_001076678.3 9.3% 8.1% (many diffs)
72 human 7594 ZNF43 zinc finger protein 43 NM_003423.4 9.1% 7.9% (many diffs)
73 human 7594 ZNF43 zinc finger protein 43 NM_001256653.1 9% 7.9% (many diffs)
74 human 10793 ZNF273 zinc finger protein 273 XM_024446635.1 8.8% 8.1% (many diffs)
75 human 10793 ZNF273 zinc finger protein 273 XM_024446636.1 8.8% 8.1% (many diffs)
76 human 10793 ZNF273 zinc finger protein 273 XM_024446637.1 8.8% 8.1% (many diffs)
77 human 10793 ZNF273 zinc finger protein 273 XM_024446638.1 8.8% 8.1% (many diffs)
78 human 10793 ZNF273 zinc finger protein 273 XM_024446639.1 8.8% 8.1% (many diffs)
79 human 10793 ZNF273 zinc finger protein 273 XM_024446640.1 8.8% 8.1% (many diffs)
80 human 10793 ZNF273 zinc finger protein 273 XM_024446641.1 8.8% 8.1% (many diffs)
81 human 7594 ZNF43 zinc finger protein 43 NM_001256648.2 8.4% 7.2% (many diffs)
82 human 7594 ZNF43 zinc finger protein 43 NM_001256649.2 8.4% 7.2% (many diffs)
83 human 7594 ZNF43 zinc finger protein 43 NM_001256650.2 8.4% 7.2% (many diffs)
84 human 7594 ZNF43 zinc finger protein 43 XM_011528257.3 8.4% 7.2% (many diffs)
85 human 7594 ZNF43 zinc finger protein 43 XM_011528259.3 8.4% 7.2% (many diffs)
86 human 7594 ZNF43 zinc finger protein 43 XM_017027207.2 8.4% 7.2% (many diffs)
87 human 7594 ZNF43 zinc finger protein 43 XM_017027208.2 8.4% 7.2% (many diffs)
88 human 7594 ZNF43 zinc finger protein 43 XM_017027209.2 8.4% 7.2% (many diffs)
89 human 7594 ZNF43 zinc finger protein 43 XM_017027210.2 8.4% 7.2% (many diffs)
90 human 7594 ZNF43 zinc finger protein 43 XM_017027211.2 8.4% 7.2% (many diffs)
91 human 7594 ZNF43 zinc finger protein 43 XM_017027212.2 8.4% 7.2% (many diffs)
92 human 7594 ZNF43 zinc finger protein 43 XM_017027213.2 8.4% 7.2% (many diffs)
93 human 7594 ZNF43 zinc finger protein 43 XM_017027214.2 8.4% 7.2% (many diffs)
94 human 7594 ZNF43 zinc finger protein 43 XM_017027215.2 8.4% 7.2% (many diffs)
95 human 7594 ZNF43 zinc finger protein 43 XM_017027216.2 8.4% 7.2% (many diffs)
96 human 51427 ZNF107 zinc finger protein 107 NM_001282359.1 8.3% 7.3% (many diffs)
97 human 340252 ZNF680 zinc finger protein 680 XM_006715959.2 8.2% 7% (many diffs)
98 human 113835 ZNF257 zinc finger protein 257 NM_001316996.2 8.2% 7.6% (many diffs)
99 human 7652 ZNF99 zinc finger protein 99 NM_001080409.3 8.1% 7.2% (many diffs)
100 human 170959 ZNF431 zinc finger protein 431 XR_001753621.1 7.8% (many diffs)
101 human 340252 ZNF680 zinc finger protein 680 XR_428175.4 7.4% (many diffs)
102 human 7697 ZNF138 zinc finger protein 138 NR_073391.2 7.3% (many diffs)
103 human 340252 ZNF680 zinc finger protein 680 XR_001744687.1 7.1% (many diffs)
104 human 340252 ZNF680 zinc finger protein 680 XR_002956428.1 7% (many diffs)
105 human 9534 ZNF254 zinc finger protein 254 NM_001278661.1 6.7% 6% (many diffs)
106 human 7644 ZNF91 zinc finger protein 91 NM_003430.4 6.1% 5.2% (many diffs)
107 human 100287226 ZNF729 zinc finger protein 729 NM_001242680.2 5.7% 5.1% (many diffs)
108 human 7757 ZNF208 zinc finger protein 208 NM_007153.3 5.7% 4.6% (many diffs)
109 human 10793 ZNF273 zinc finger protein 273 NR_003099.1 5.3% (many diffs)
110 human 388524 RPSAP58 ribosomal protein SA pseudo... NR_149350.2 5% (many diffs)
111 human 7643 ZNF90 zinc finger protein 90 XR_001753753.2 5% (many diffs)
112 human 388524 RPSAP58 ribosomal protein SA pseudo... NR_149351.2 4.9% (many diffs)
113 human 7644 ZNF91 zinc finger protein 91 XR_001753756.2 4.3% (many diffs)
114 human 170959 ZNF431 zinc finger protein 431 XR_001753620.1 4.2% (many diffs)
115 human 7644 ZNF91 zinc finger protein 91 XR_001753755.2 3.1% (many diffs)
116 human 7644 ZNF91 zinc finger protein 91 XR_001753754.2 2.4% (many diffs)
117 human 7644 ZNF91 zinc finger protein 91 XR_002958354.1 1.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
90
ORF end:
333
ORF length:
243
Sequence:
1TCAGACAGTG GTTCAAAGTT TTTTTCTTCC ATTTCAGGTG TCGTGAGGCT AGCATCGATT
61GATCAACAAG TTTGTACAAA AAAGTTGGCA TGGGACCACT GACATTTAGG GATGTGGCCA
121TAAAATTCTC TCTGGAGGAG TGGCAATGCC TGGACACTTC ACAGCAGAAT TTGTATAGGA
181ATGTGATGTT AGATAACTAC AGAAACCTGG TCTTCCTGGG TATTGCTGTC TCTAAGCCAG
241ACCTGATCAC TTGTCTGGAG CAAGGAAAAG AGCCCTGCAA TATGAAGAGA CATGCGATGG
301TAGCCAAACC CCCAGGTTGG AGTGCAGTGG CGTGCCCAAC TTTCTTGTAC AAAGTGGTTG
361ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
421GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGAGC
481CGACTTGCTC CATGATGCAG CTACGCGTTA AGTCgacaat caacctctgg attacaaaat
541ttgtgaaaga tt

Download FASTA (ORF) (Full)