Construct: ORF TRCN0000476486

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015989.1_s317c1
Derived from:
ccsbBroadEn_08581
DNA Barcode:
AGTATTTAAATCGATGTCTATAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF701 (55762)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476486
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55762 ZNF701 zinc finger protein 701 NM_018260.2 99.7% 99.3% (many diffs)
2 human 55762 ZNF701 zinc finger protein 701 NM_001172655.1 87.3% 87% (many diffs)
3 human 55762 ZNF701 zinc finger protein 701 XM_011527092.1 87.3% 87% (many diffs)
4 human 170958 ZNF525 zinc finger protein 525 NM_001348156.2 77.5% 70.3% (many diffs)
5 human 90333 ZNF468 zinc finger protein 468 NM_001008801.2 76.2% 68.5% (many diffs)
6 human 90333 ZNF468 zinc finger protein 468 XM_017027443.1 72.7% 65.2% (many diffs)
7 human 170958 ZNF525 zinc finger protein 525 NM_001348157.2 70.4% 62.8% (many diffs)
8 human 90333 ZNF468 zinc finger protein 468 XM_017027444.1 66.6% 58.6% (many diffs)
9 human 126017 ZNF813 zinc finger protein 813 NM_001004301.4 66.4% 57.2% (many diffs)
10 human 388559 ZNF888 zinc finger protein 888 NM_001310127.1 60.4% 56% (many diffs)
11 human 388559 ZNF888 zinc finger protein 888 XM_005259451.5 60.4% 56% (many diffs)
12 human 388559 ZNF888 zinc finger protein 888 XM_017026799.2 60.4% 56% (many diffs)
13 human 344787 ZNF860 zinc finger protein 860 NM_001137674.3 58.6% 54.3% (many diffs)
14 human 344787 ZNF860 zinc finger protein 860 XM_017006299.1 58.6% 54.3% (many diffs)
15 human 7576 ZNF28 zinc finger protein 28 NM_006969.5 57% 50.9% (many diffs)
16 human 7576 ZNF28 zinc finger protein 28 XM_011527262.2 57% 50.9% (many diffs)
17 human 81856 ZNF611 zinc finger protein 611 NM_001161499.2 56.7% 49.2% (many diffs)
18 human 81856 ZNF611 zinc finger protein 611 NM_001161500.1 56.7% 49.2% (many diffs)
19 human 81856 ZNF611 zinc finger protein 611 NM_030972.3 56.7% 49.2% (many diffs)
20 human 388559 ZNF888 zinc finger protein 888 XM_017026800.2 55.4% 51% (many diffs)
21 human 7576 ZNF28 zinc finger protein 28 NM_001369764.1 55.3% 49.4% (many diffs)
22 human 7576 ZNF28 zinc finger protein 28 NM_001369763.1 53.6% 45.4% (many diffs)
23 human 388561 ZNF761 zinc finger protein 761 NM_001008401.4 53.3% 46.1% (many diffs)
24 human 388561 ZNF761 zinc finger protein 761 NM_001289951.2 53.3% 46.1% (many diffs)
25 human 388561 ZNF761 zinc finger protein 761 NM_001289952.1 53.3% 46.1% (many diffs)
26 human 110116772 ZNF765-ZNF761 ZNF765-ZNF761 readthrough NM_001350496.2 53.3% 46.1% (many diffs)
27 human 7576 ZNF28 zinc finger protein 28 NM_001369765.1 52.2% 45.9% (many diffs)
28 human 388559 ZNF888 zinc finger protein 888 XM_017026798.2 52.2% 48.4% (many diffs)
29 human 81856 ZNF611 zinc finger protein 611 NM_001161501.1 51.7% 44.3% (many diffs)
30 human 7576 ZNF28 zinc finger protein 28 NM_001369762.1 49.9% 43.7% (many diffs)
31 human 7576 ZNF28 zinc finger protein 28 XM_024451688.1 49.9% 43.7% (many diffs)
32 human 55762 ZNF701 zinc finger protein 701 XR_001753718.2 46.4% (many diffs)
33 human 388558 ZNF808 zinc finger protein 808 NM_001039886.4 44.5% 38% (many diffs)
34 human 388558 ZNF808 zinc finger protein 808 NM_001321424.1 44.5% 38% (many diffs)
35 human 388558 ZNF808 zinc finger protein 808 NM_001321425.1 44.5% 38% (many diffs)
36 human 388558 ZNF808 zinc finger protein 808 XM_024451506.1 44.5% 38% (many diffs)
37 human 388558 ZNF808 zinc finger protein 808 XM_024451507.1 44.5% 38% (many diffs)
38 human 388558 ZNF808 zinc finger protein 808 XM_024451508.1 44.5% 38% (many diffs)
39 human 7576 ZNF28 zinc finger protein 28 XM_024451686.1 42.8% 37.6% (many diffs)
40 human 91664 ZNF845 zinc finger protein 845 NM_001321522.1 41.8% 37.1% (many diffs)
41 human 91664 ZNF845 zinc finger protein 845 NM_001321523.1 41.8% 37.1% (many diffs)
42 human 91664 ZNF845 zinc finger protein 845 NM_001321524.1 41.8% 37.1% (many diffs)
43 human 91664 ZNF845 zinc finger protein 845 NM_138374.3 41.8% 37.1% (many diffs)
44 human 388558 ZNF808 zinc finger protein 808 NM_001363550.1 40.4% 34.1% (many diffs)
45 human 388558 ZNF808 zinc finger protein 808 XM_005258909.4 40.4% 34.1% (many diffs)
46 human 388558 ZNF808 zinc finger protein 808 XM_024451509.1 40.4% 34.1% (many diffs)
47 human 79986 ZNF702P zinc finger protein 702, ps... NR_003578.1 40% (many diffs)
48 human 55762 ZNF701 zinc finger protein 701 XR_001753717.2 39.2% (many diffs)
49 human 100529240 ZNF816-ZNF321P ZNF816-ZNF321P readthrough NM_001202473.1 39.2% 33.4% (many diffs)
50 human 55762 ZNF701 zinc finger protein 701 XR_001753715.2 39% (many diffs)
51 human 55762 ZNF701 zinc finger protein 701 XR_001753716.2 36.7% (many diffs)
52 human 388558 ZNF808 zinc finger protein 808 XR_002958314.1 27.2% (many diffs)
53 human 388558 ZNF808 zinc finger protein 808 XR_935832.3 27.2% (many diffs)
54 human 90333 ZNF468 zinc finger protein 468 NR_102301.2 26.5% (many diffs)
55 human 90333 ZNF468 zinc finger protein 468 NR_102300.2 25.9% (many diffs)
56 human 90333 ZNF468 zinc finger protein 468 NR_102299.2 25.8% (many diffs)
57 human 7576 ZNF28 zinc finger protein 28 NR_163139.1 24.9% (many diffs)
58 human 170958 ZNF525 zinc finger protein 525 NR_145445.2 23.1% (many diffs)
59 human 7576 ZNF28 zinc finger protein 28 NM_001369761.1 16.5% 14.1% (many diffs)
60 human 7576 ZNF28 zinc finger protein 28 NM_001369766.1 16.4% 12.5% (many diffs)
61 human 90333 ZNF468 zinc finger protein 468 NM_001277120.2 16.1% 13.5% (many diffs)
62 human 162967 ZNF320 zinc finger protein 320 XM_024451399.1 15.9% 10.8% (many diffs)
63 human 7576 ZNF28 zinc finger protein 28 NM_001369768.1 12.6% 11% (many diffs)
64 human 388561 ZNF761 zinc finger protein 761 NM_001289953.1 12.4% 10.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1464
ORF length:
1395
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggctcttcct cagggtctac tgacattcag ggatgtggcc atagaattct
121ctcaggagga gtggaaatgc ctggaccctg ctcagaggac tctatacaga gacgtgatgc
181tggagaatta taggaacctg gtctccctgg atacctcttc caaatgcatg atgaagatgt
241tctcatcaac aggacaaggc aatacagaag tggtccacac agggacattg caaatacatg
301caagtcatca cattggagat acttgcttcc aggaaattga gaaagatatt catgactttg
361tgtttcagtg gcaagaaaat gaaacaaatg gccatgaagc actcatgaca aaaatcaaaa
421agttgatgag tagtacagag cgacatgatc aaaggcatgc tggaaacaaa cctattaaaa
481atgagcttgg atcaagcttt cattcgcatc tgcctgaagt gcacatattt caccccgaag
541ggaaaattgg taatcaagtt gagaaggcta tcaacgatgc tttctcagtt tcagcatccc
601aacgaatttc ctgtaggcca aaaactcgta tttctaataa gtataggaat aatttcctcc
661agtcttcatt actcacacaa aaacgggaag tacacacaag agaaaaatct ttccaacgta
721atgagagtgg caaagccttt aatggtagct cactcttaaa aaaacatcag ataatccatt
781taggagacaa acagtataaa tgtgatgtat gcggcaagga ctttcatcag aagcgatacc
841ttgcatgcca tagatgtcac actggtgaga atccttacaa gtgtaatgag tgtggcaaga
901cattcagtca caattcagcc ctgttagttc acaaggcaat tcatactgga gagaaacctt
961acaagtgtaa tgaatgtggc aaggttttta atcaacaatc aaaccttgca cgtcatcata
1021gagttcatac tggagagaaa ccTTACAAAT GTGAAGAATG TGACAAAGTT TTCAGTCGCA
1081AATCACACCT TGAAAGACAT AGGAGAATTC ACACTGGAGA GAAACCATAC AAATGTAAGG
1141TTTGTGACAA GGCTTTCAGA CGTGATTCAC ACCTGGCACA ACATACTGTA ATTCACACTG
1201GAGAGAAACC TTACAAGTGT AATGAGTGTG GCAAGACCTT CGTTCAAAAT TCATCTCTTG
1261TAATGCATAA GGTCATTCAT ACTGGAGAGA AACGTTACAA GTGTAATGAA TGTGGCAAGG
1321TTTTTAATCA CAAATCAAAC CTTGCATGTC ATCGTAGACT TCATACTGGA GAGAAACCTT
1381ACAAGTGTAA TGAATGTGGC AAGGTTTTTA ATCGAAAATC AAACCTTGAA CGTCATCATA
1441GACTTCATAC TGGAAAGAAA TCTTTGCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
1501AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
1561TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAA GTATTTAAAT
1621CGATGTCTAT AACACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
1681att

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