Overview of Plasma cells subtypes
Gene program activation in Plasma cell subtypes
- CRC immune hubs
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Overview
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T cell programs
- pTNI overview
- pTNI01 (Fos, Jun)
- pTNI02 (Treg)
- pTNI03 (prolif)
- pTNI04
- pTNI05
- pTNI06 (MHCII, IFNg)
- pTNI07 (proteasome, ER)
- pTNI08 (innate T)
- pTNI09 (Translation)
- pTNI10
- pTNI11
- pTNI12
- pTNI13 (prolif)
- pTNI14 (gd-like T)
- pTNI15 (HSPs)
- pTNI16 (cytotoxicity)
- pTNI17
- pTNI18 (CXCL13 T)
- pTNI19 (ISGs)
- pTNI20 (GZMK)
- pTNI21 (KLRB1)
- B cell programs
- Plasma cell programs
- Mast cell programs
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Myeloid cell programs
- pM overview
- pM01 (SEPP1, LYVE1)
- pM02 (MMPs)
- pM03 (glycolysis)
- pM04 (Fos, Jun)
- pM05 (C1Q)
- pM06 (APOE)
- pM07 (pDC)
- pM08 (proteasome, protein folding)
- pM09
- pM10 (CCL2, SPP1)
- pM11 (mregDC)
- pM12 (HSPs)
- pM13
- pM14 (VEGFA)
- pM15 (Granulo)
- pM16 (S100)
- pM17
- pM18 (prolif)
- pM19
- pM20 (inflammatory)
- pM21 (ISGs)
- pM22 (DC, MHCII)
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Stromal cell programs
- pS overview
- pS01 (Smooth Muscle)
- pS02 (Fibro matrix/ stem cell niche)
- pS03 (ACTA2)
- pS04
- pS05 (ISGs)
- pS06
- pS07
- pS08 (Collagens)
- pS09
- pS10 (angiogenesis)
- pS11 (Fibro CCL8)
- pS12 (prolif)
- pS13 (inflammatory)
- pS14
- pS15 (Perictye)
- pS16 (Metallothionein)
- pS17 (Fibro BMP-producing)
- pS18 (Endo art)
- pS19 (Endo cap)
- pS20
- pS21 (Fos, Jun)
- pS22 (Schwann)
- pS23 (Endo lymph)
- pS24 (Endo ven)
- pS25
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MMRd epithelial programs
- pEpiTd overview
- pEpiTd01 (Fos, Jun)
- pEpiTd02 (MUC13)
- pEpiTd03
- pEpiTd04
- pEpiTd05 (Metallothionein)
- pEpiTd06
- pEpiTd07 (Reg family genes)
- pEpiTd08
- pEpiTd09
- pEpiTd10 (G2 phase)
- pEpiTd11 (sterol biosynthesis)
- pEpiTd12
- pEpiTd13 (glycolysis)
- pEpiTd14 (Tuft-like)
- pEpiTd15 (SPINK4)
- pEpiTd16 (M phase)
- pEpiTd17 (inflammatory chemokines)
- pEpiTd18
- pEpiTd19 (MHCII, ISGs)
- pEpiTd20
- pEpiTd21 (TFF1, S100P)
- pEpiTd22 (KRT18, actin)
- pEpiTd23
- pEpiTd24
- pEpiTd25
- pEpiTd26 (mitochondrial genes, MUC4)
- pEpiTd27
- pEpiTd28 (Elongation factors)
- pEpiTd29 (XBP1)
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MMRp epithelial programs
- pEpiTp overview
- pEpiTp01 (ARID3A, TSPAN6, PRDX5, ROMO1)
- pEpiTp02 (metallothionein)
- pEpiTp03
- pEpiTp04 (S/G2/M phase)
- pEpiTp05
- pEpiTp06
- pEpiTp07
- pEpiTp08 (TFF3)
- pEpiTp09
- pEpiTp10
- pEpiTp11
- pEpiTp12
- pEpiTp13
- pEpiTp14
- pEpiTp15 (B2M, MHCI)
- pEpiTp16 (Elongation factors)
- pEpiTp17
- pEpiTp18 (G2 phase)
- pEpiTp19 (HSPA1A, CD46)
- pEpiTp20
- pEpiTp21 (ISGs)
- pEpiTp22 (KRT8, actin)
- pEpiTp23 (POLR1D)
- pEpiTp24 (Tuft-like)
- pEpiTp25 (Fos, Jun)
- pEpiTp26 (glycolysis)
- pEpiTp27
- pEpiTp28 (SPINK4, XBP1)
- pEpiTp29 (SEPP1, SLC26A3)
- pEpiTp30 (SLC26A2)
- pEpiTp31 (CKB)
- pEpiTp32
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Global epithelial programs
- pEpi overview
- pEpi01 (MUC13)
- pEpi02 (ribosomal genes)
- pEpi03 (Fos, Jun)
- pEpi04 (sterol biosynthesis)
- pEpi05 (TGFBI, HSPA1A, CD46)
- pEpi06 (inflammatory chemokines)
- pEpi07
- pEpi08
- pEpi09 (metallothionein)
- pEpi10
- pEpi11
- pEpi12 (POLR1D, SAP18, PDCD5)
- pEpi13 (glycolysis)
- pEpi14 (Reg family genes)
- pEpi15 (SLPI)
- pEpi16 (SLC26A2)
- pEpi17 (TFF1, S100P)
- pEpi18 (Tuft-like)
- pEpi19
- pEpi20 (G2 phase)
- pEpi21 (S phase)
- pEpi22 (ARID3A, TSPAN6)
- pEpi23
- pEpi24 (GPX2, PRDX5, ROMO1)
- pEpi25 (ribosomal genes)
- pEpi26
- pEpi27
- pEpi28
- pEpi29 (REG4, AGR2, AGR3)
- pEpi30 (ISGs)
- pEpi31
- pEpi32 (G2/M phase)
- pEpi33
- pEpi34 (MHCII, ISGs)
- pEpi35 (CLCA1, TFF3, SPINK1)
- pEpi36 (KRT8/KRT18, actin)
- pEpi37 (mitochondrial genes)
- pEpi38
- pEpi39 (SEPP1, SLC26A3)
- pEpi40 (CKB, AOC1, CEACAM6)
- pEpi41 (GSN, MUC2, MUC4)
- pEpi42 (elongation factors)
- pEpi43 (SPINK4, XBP1)
Plasma overview